Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq42954 196 2e-45 >seq42954 Length=2876 Score = 196 bits (216), Expect = 2e-45 Identities = 256/352 (73%), Gaps = 2/352 (1%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | |||||| ||||| | |||||||| | ||||| |||||||||||||| || Sbjct 1772 CATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTT 1831 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 || ||| |||||||||| ||||||||| ||||| || || | ||||| || ||||| | Sbjct 1832 ACCTGTG-TTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGT 1890 Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111 | || ||||| ||| | ||| ||||||||||||||| ||||| ||||| | | Sbjct 1891 AAATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGT 1950 Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGG 26171 || | ||| |||||||||| |||| ||| |||||| || || |||| | || | | Sbjct 1951 TGTACACTCTCAACATTGGCACTAGACCATTTGAAACCCCATTAGTGCCAGCTATATAAG 2010 Query 26172 ATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAG 26231 | || | |||||| || | ||| | ||| || ||||| || |||| ||||| Sbjct 2011 ACCCCTGGGCTCTAATGCAATGTGTATGTAAACCTATGCCACCGGCAGATTTAGAAATTA 2070 Query 26232 CTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 |||||| | | | ||||||||||| |||| || ||||| ||||||| Sbjct 2071 ATGCACATTGTTTTAAAGTATCGAAAATACCTTCAATACTATCGTCTTTCAT 2122 Score = 127 bits (140), Expect = 1e-24 Identities = 351/525 (67%), Gaps = 16/525 (3%) Strand=Plus/Plus Query 24649 ATTTT--CTTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTC-TAAGATA 24705 ||||| |||| |||| ||||| || |||| | |||||||||| || | |||| || Sbjct 522 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAG-TA 580 Query 24706 ATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGC 24765 |||||||| ||||| || | |||||||| ||| ||||| || || |||||||| | Sbjct 581 GTACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCC 640 Query 24766 AATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCT 24825 | ||| | | | | | | ||| | |||||| |||| | ||| | ||| Sbjct 641 ATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCTCCTCT 700 Query 24826 ATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTC 24885 ||| || || | | ||| ||||||| || || || | | |||||||| || Sbjct 701 ATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATC 760 Query 24886 TTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATT-TTCTCTC-AATA-G 24942 | |||| || | || || || |||| | ||| | |||||||| || | | |||| | Sbjct 761 TCTTATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAG 820 Query 24943 ATTCAATCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTAATCAAGTGTT 25001 ||| | |||||| ||| | || | | |||| ||| | | | || | Sbjct 821 ATT---TTTCATATCTTCATCCCATAAATCAGCTCGAGTCAA-ATCAGTCAGAAGATGAT 876 Query 25002 TATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA--GTTTGAAGTGAA 25059 || | | | |||||||||||| || |||||||| ||| ||| ||||| || || Sbjct 877 GGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCT--TTGGTAAATATTTGATGTAAA 934 Query 25060 TGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGC 25119 |||||||||| ||||| | || || | ||||| | |||||| || || ||||| ||| Sbjct 935 TGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGC 994 Query 25120 TATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTT 25164 ||| ||||| ||||| | |||||||| ||| | |||| || ||| Sbjct 995 TATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTT 1039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252249445078025