Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq42954 194 2e-44 >seq42954 Length=2876 Score = 194 bits (214), Expect = 2e-44 Identities = 901/1420 (63%), Gaps = 59/1420 (4%) Strand=Plus/Minus Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| || || ||||| | ||| | ||| | || ||||| || || |||||||||||| Sbjct 2296 GAAAGACCTCAACACATGCTTATGAGAGTCTCCATAGGCATTCATGGTGAAGACATTGAT 2237 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 75324 || | | || || | | |||||| | | ||| || | || |||| || || Sbjct 2236 AGTGCAATCAATACTTATAATATGATGTCAGAGAAATATTTT-ACACATGCAAGCCCTAC 2178 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384 || ||| |||| |||||| | || ||| | ||| ||||||||||| || | || Sbjct 2177 ACTGTTCTCAGCTGCTACACCGCGGCCACAGCTTTCCTCCTGCTTCCTTATAGCTATGAA 2118 Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444 || || || | ||||| | | ||| | | | ||||| ||| || || | Sbjct 2117 AGACGATAGTATTGAAGGTATTTTCGATACTTTAAAACAATGTGCATTAATTTCTAAATC 2058 Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504 || || || || || | || | ||| | |||||| | ||| ||| || Sbjct 2057 TGCCGGTGGCATAGGTTTACATACACATTGCATTAGAGCCCAGGGGTCTTATATAGCTGG 1998 Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || ||||| ||| ||||| | | |||||| | | || | ||| || || | Sbjct 1997 CACTAATGGGGTTTCAAATGGTCTAGTGCCAATGTTGAGAGTGTACAACAATACTGCCAG 1938 Query 75565 CTATGTAAATCAAGCGGGG------CGTCGCAAGGGGTCCATC-GCGGTCTACTTGGAAC 75617 |||||| |||||| || |||| | ||| ||| || | ||||| || | Sbjct 1937 ATATGTAGATCAAGGTGGAAACAAACGTCCC----GGTGCATTTGCAATTTACTTAGAGC 1882 Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGG 75677 | |||||||| || || | |||||| | || ||| | ||| |||| | ||||| Sbjct 1881 CTTGGCATGCGGACATATTTGAGTTCTTAGATTTAAAAAAGAACACAGGTAAGGAAGAAA 1822 Query 75678 CTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 | |||||| || |||| | | ||||| ||||| || || ||||| |||| | Sbjct 1821 TGAGAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGATCTGTTTATGAAAAGGGTAG 1762 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797 | ||| || | ||| ||| | ||||| | | || || ||| | ||| Sbjct 1761 AAAAGGATGAAGATTGGAGTCTCATGTGTCCTCATGATTGTCCTGGCCTCGCTGACTGTT 1702 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAG----GGTAGAGCCAAT 75853 || ||||| || ||||| || || | || |||||||| || ||| | || Sbjct 1701 ACGGAGAGGAATTCGAAGCACTATATGCCAAATATGAAGAAGAAAAACGGTTTATAAAAC 1642 Query 75854 GCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 | | | | ||| || | |||||| | ||| | || | || ||||||||| Sbjct 1641 GAGTCAG----AGCTCAAGAGTTATGGAAGTCAATTATAGAAGCTCAAGTGGAGACTGGT 1586 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 |||||||||||| | || ||||||||||| |||| ||||||||| ||||| ||| | || Sbjct 1585 ACACCATATATGTTGTATAAGGATGCTTGCAACAGGAAGAGTAATCAAAAAAATCTTGGC 1526 Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033 || || || | ||||||||||| || || | | ||||| | ||||| | Sbjct 1525 ACTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTG 1466 Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACT 76093 || || ||||| | || || || || ||| | || ||| |||| | | ||| Sbjct 1465 GCAGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGT---TGAAAATAATCG---A 1412 Query 76094 TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 ||| ||| | ||||| | | |||||||| |||||||| || | ||| ||||| |||| Sbjct 1411 TTTAATTTTAAAAAATTAAAAGAAATCACTAAGATTGTGACTCAGAATTTAAACAAAGTC 1352 Query 76154 ATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGA 76210 ||||| || |||||||| || ||| || || || |||||| | ||| | Sbjct 1351 ATTGATGTTAACTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATATGAGGCACCGT 1295 Query 76211 CCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACGCATT 76269 ||| | ||| | |||||||| ||| | || ||| |||| | ||| || ||| | | Sbjct 1294 CCTGTCGGTATTGGTGTTCAGGGTATGGCAGATACATTTGTGTTGATGAGAATAC-CTTA 1236 Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329 || || |||| | | ||| | || |||||||| || ||| | | | Sbjct 1235 CGAAAGTGAGAAAGCAATACTCCTTAATCAACAAATATTTGAAACAATTTATTATGGTGC 1176 Query 76330 CCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 | || || ||||||||||| || ||| ||||| | || |||| | | || Sbjct 1175 ATTAGAAGCTAGTTGTGAATTAGCAGAAAAAGAAGGTGCATACAGCACATATCAAGGAAG 1116 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTA 76449 ||| || |||||| | || |||| |||||||||| ||| || ||| ||| Sbjct 1115 TCCAGCTAGCCAAGGTATCCTCCAGTATGATATGTGG--------AACAAAACTC--CTA 1066 Query 76450 C----------GACTGGGATGTTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAA 76497 | |||||| ||| ||||| ||| || ||| | | ||| | || || Sbjct 1065 CAGACCTTTGGGACTGGACTGTCCTCAAAGAAAAGATAGCAA--AACATGGTTTGCGCAA 1008 Query 76498 CAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 76557 ||| ||||| ||||| ||||| || ||||| || |||||||| | || || | ||| Sbjct 1007 TTCTCTATTGATAGCACCTATGCCGACTGCCTCTACTGCACAAATTCTTGGCAACACTGA 948 Query 76558 ATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGA 76597 || |||||||||| ||| |||| || |||| |||||| Sbjct 947 ATCTTTTGAACCATTTACATCAAATATTTACCAAAGAAGA 908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594657989659360