Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq6456 150 3e-31 seq72952 149 1e-30 seq57945 87.8 3e-12 >seq6456 Length=2491 Score = 150 bits (166), Expect = 3e-31 Identities = 179/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 193119 TAAGTAATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAA 193178 |||| | |||| | ||||||||||| || || || || || | |||| ||||| | Sbjct 742 TAAGAAGTTTACACACCACCTCTCAGTCTGAGAACAAGGTGGAGAGTAGATTCTTTCTGA 801 Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| || || ||||| |||| ||| || | ||| || ||||||||||| || ||| Sbjct 802 ATATTGTAATCAGATAATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTC 861 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || || || || |||||||| || || ||||| | || | |||| || ||| Sbjct 862 TGTTGGTCTGGGGGAATGCCTTCTTTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTA 921 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || |||| || ||||| | || |||||||| || || |||||||| || || |||||| Sbjct 922 TCAGAAGCTTCTACTTCCAATGTGATAGTTTTGCCAGTCAGCGTTTTCACGAAAATTTGC 981 Query 193359 ATT 193361 ||| Sbjct 982 ATT 984 Score = 134 bits (148), Expect = 2e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||| || | || | || | ||||| |||| ||||| ||||| Sbjct 1431 AATTTGCATTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCTTTTTGTATATT 1490 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | || | ||| || | ||||||||| |||||||| | || ||||| Sbjct 1491 ATAGTCTGACAGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTG 1550 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||||| || ||||||||||| || || || | || | |||| || || || || Sbjct 1551 GTCAGGAGGAATGCCTTCTTTATCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGA 1610 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||||| ||| |||||||| || || || ||||| ||||| |||||||| Sbjct 1611 AGCTTCCACTTCTAAAGTAATAGTTTTGCCAGTCAGTGTTTTAACAAAAATTTGCAT 1667 Score = 132 bits (146), Expect = 9e-26 Identities = 172/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||| || | || | || | ||||| |||| || || |||||| Sbjct 1203 AATTTGCATTCCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATT 1262 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | || | ||| ||||| ||||| ||||| ||||| | |||||||| Sbjct 1263 ATAATCAGACAGAGTGCGTCCATCTTCTAACTGTTTGCCGGCGAAAATCAGCCTCTGTTG 1322 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || ||||| || || || ||||| | || | |||| || ||||| || Sbjct 1323 GTCTGGAGGAATGCCTTCCTTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGA 1382 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || ||||| | || |||||||| ||||| || ||||||||||| ||||||||| Sbjct 1383 AGCTTCCACTTCCAATGTGATAGTTTTGCCTGTCAGTGTTTTTACAAAAATTTGCATT 1440 >seq72952 Length=1956 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| || |||||||| | |||||| |||| ||||| || || ||||| Sbjct 1701 ATACCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA 1760 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | | ||| || ||||| || || || ||||| | | |||||||| ||| Sbjct 1761 GAAAGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGA 1820 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| ||||| ||||| | |||| |||| ||| || || || | || Sbjct 1821 GGAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCT 1880 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||||| ||| || ||||| || || || ||||| ||||| |||||||| Sbjct 1881 ACTTCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1930 Score = 141 bits (156), Expect = 2e-28 Identities = 173/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||| || || ||||| ||||| | |||| ||| || || || Sbjct 783 ATTTGCATACCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTG 842 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| ||||| |||| ||| || | || || |||||||| || | | |||||| Sbjct 843 TAGTCCGATAAAGTTCGCCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGTTGTTGA 902 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || || ||||||||||| || || | |||| ||| ||| || || || Sbjct 903 TCTGGAGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACGTTTTCAATGGTGTCAGAT 962 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || ||||||||||| || || ||||| || || || |||||||||||||| Sbjct 963 GGCTCCACCTCTAGAGTTATGGTCTTTCCTGTAAGTGTCTTGACAAATATTTGCAT 1018 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 193151 TACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210 ||||| || | |||| ||||| ||| || || || || | || | | ||| || Sbjct 1493 TACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTC 1552 Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270 ||||| || || ||||| || | | ||| |||||||| || || || ||||| ||||| Sbjct 1553 CAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTG 1612 Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTT 193330 ||||| | ||||| |||| ||||||||| || | || ||||||||||| || || || Sbjct 1613 GATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCTAGAGTAATGGTCTT 1672 Query 193331 ACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| ||||| ||||| || ||||| Sbjct 1673 TCCAGTTAGGGTTTTAACAAAAATCTGCAT 1702 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| |||| || || ||||||| || | || | |||||| ||||| || || Sbjct 561 ATACCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAATCA 620 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || || | | ||| || ||||| || || |||||||| | | |||||| || || Sbjct 621 GACAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGG 680 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| ||||| |||||||| | || | ||| || || || || | || Sbjct 681 GGAATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCT 740 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || ||||||| ||||| |||||||||||||| Sbjct 741 ACTTCCAGGGTAATGGTCTTTCCTGTTAATGTTTTCACAAATATTTGCAT 790 >seq57945 Length=292 Score = 87.8 bits (96), Expect = 3e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||| || | || | |||| ||||| || | || || |||||| Sbjct 191 AATTTGCATTCCACCCCTAAGACGCAACACCAAGTGCAAAGTCGATTCCTTCTGAATATT 132 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | || | ||| || | ||| |||||||| ||||||| ||| ||||| Sbjct 131 ATAGTCTGACAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATTAGTCTTTGTTG 72 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || ||||| || || | |||| || || ||||| || Sbjct 71 ATCGGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTCTCGATTGTATCAGA 12 Query 193304 AGACTCAACTT 193314 || || |||| Sbjct 11 AGCTTCCACTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896771603669040