Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq515 132 6e-25 seq66299 96.9 4e-14 >seq515 Length=5297 Score = 132 bits (146), Expect = 6e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| |||||| ||| | || | ||| | |||||| | ||| | | || Sbjct 707 GCTTGGCCAACTCGCCGGGCAACAGGAGCCTCACTGAGGTCTGCACCTCCCTGGACGTGA 766 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||||| | |||||| |||| || || || ||||||| | ||||||| |||| | Sbjct 767 TCGTGGACCTCTTGTTGTAGTGGGCTAGTCGCGACGCCTCGGCGGCGATGCGCTCGAAGA 826 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||||||| |||| |||||||||| ||| |||| Sbjct 827 TGTCGTTCACGAACGAGTTCATGATGGACATCGCCTTGCTGGAGATGCCGGTGTCCGGGT 886 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || |||||||| ||||||||| Sbjct 887 GGACTTGTTTGAGCACTTTGTAGATG 912 >seq66299 Length=865 Score = 96.9 bits (106), Expect = 4e-14 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || || |||||| | | || || || |||| |||||| | || | || |||||| Sbjct 299 GCGAGCTCGCCGGGAAGGAGGAGACGGACGGAGGTCTGCACTTCCCTCGACGTGATCGTT 358 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 | |||||| |||||||||| ||| ||||||| |||| || || | || ||| Sbjct 359 GACCTCTTGTTGTAGTGCGCCAGGCGGGACGCCTCGGCCGCGATACGTTCAAAAATATCG 418 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 |||||||| || ||||| | ||||| | ||| | ||||| || ||| ||||| ||| Sbjct 419 TTGACAAAGGAATTCATTATAGACATGGCCTTACTCGAGATCCCAGTGTCCGGGTGAACC 478 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| | ||| ||||| ||| Sbjct 479 TGCTTCAACACTTTGTAAATG 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6086102164706999