Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq72952 107 1e-18 seq6456 102 5e-17 seq57945 87.8 1e-12 >seq72952 Length=1956 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| |||||| || ||||| |||||||||| | ||| |||| Sbjct 807 AGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAAGTTCGCCCATCT 866 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||| ||||| || ||||| || ||| | || | ||||| || || Sbjct 867 TCCAGCTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGGAATACCCTCTTTATCT 926 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | | || | ||| | ||| || || | ||||||||| Sbjct 927 TGAATCTTAGCCTTTACGTTTTCAATGGTGTCAGATGGCTCCACCTCTAGAGTTATGGTC 986 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || ||||| ||||| || ||||| Sbjct 987 TTTCCTGTAAGTGTCTTGACAAATATTTGCAT 1018 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||| | ||| ||| |||||||| || ||||| || || | || |||| ||| Sbjct 354 ACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCC 413 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || ||||| || || ||||| || ||| | || | ||||| ||||| | Sbjct 414 AGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGG 473 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || ||| || | | || | || || || || || | || || || || Sbjct 474 ATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTTTTC 533 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| |||||||||||||||||||| Sbjct 534 CCTGTGAGTGTCTTTACAAAGATCTGCAT 562 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| ||||| ||||| || ||||| | || |||| |||||||| ||||| || || Sbjct 1284 TCCTTTTGAATATTATAATCAGATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAA 1343 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || | || |||||| | || | || || ||||| | || ||| || ||| | Sbjct 1344 ATAAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTT 1403 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | || || || | ||| ||||| ||||| || || ||||| ||| Sbjct 1404 TCAATAGTGTCAGATGGTTCTACCTCTAGGGTGATGGTTTTTCCTGTAAGAGTCTTAACA 1463 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 1464 AAGATCTGCAT 1474 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || || || |||||||| || || || || |||| |||| ||| Sbjct 1494 ACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCC 1553 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || || ||||| || || ||||| || | || | ||||| ||||| | Sbjct 1554 AATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGG 1613 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| ||| || | | || | ||| || || || || | || ||||||||| Sbjct 1614 ATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCTAGAGTAATGGTCTTT 1673 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| || ||||| |||||||| Sbjct 1674 CCAGTTAGGGTTTTAACAAAAATCTGCAT 1702 >seq6456 Length=2491 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| || || |||||||| | || ||||||||||| || ||||| | Sbjct 2123 TTCCACCTCTCAGCCGTAGTACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 2182 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| | || |||| || || |||||||| || || || |||| |||||| ||| | | Sbjct 2183 ATAGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 2242 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| || || | |||||| || || | | || | ||| || || | Sbjct 2243 GAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 2302 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || ||||| || || || ||||||||||| || ||||| Sbjct 2303 CTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 2351 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||| || ||||| || || | || |||| || || |||||||| || || Sbjct 1705 TCCTTCTGAATATTGTAGTCTGACAGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAA 1764 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || |||| |||||| ||| | || | ||||| || || | |||||| || || | Sbjct 1765 ATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTT 1824 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || || || || | || || ||||| || || || ||||||||| Sbjct 1825 TCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACA 1884 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 1885 AAAATTTGCAT 1895 >seq57945 Length=292 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| ||||| | | || |||| ||| | || ||||||||||| |||||||| | Sbjct 183 TTCCACCCCTAAGACGCAACACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTG 124 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || |||| |||| |||||||||||||||||||| || |||| ||| || || | | Sbjct 123 ACAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCGGGAG 64 Query 34869 GCACCCCCTCCTTGTC 34884 | | || |||||||| Sbjct 63 GAATGCCTTCCTTGTC 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324675261088793