Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq15400 259 4e-64 seq72952 170 1e-37 seq6456 145 6e-30 seq91968 105 5e-18 seq57945 87.8 1e-12 seq148147 84.2 2e-11 >seq15400 Length=3181 Score = 259 bits (286), Expect = 4e-64 Identities = 650/976 (67%), Gaps = 29/976 (3%) Strand=Plus/Minus Query 45105 TGTCGCCGCTTATTTCGTTGAATGGGGAGTGTATGGGCGCAATTTTCCTATGAACCGCGT 45164 ||| | ||| || ||||| |||||||| || ||| | || || || || | || | Sbjct 1364 TGTGGGCGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTAT 1305 Query 45165 GCCAGTGCCGAACCTTACGCATTTGTTATACGGTTTTATTCCTATATGCGGTGGCGATGG 45224 || | || || ||||| |||||| | || || |||||||| || ||||| || || || Sbjct 1304 ACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGG 1245 Query 45225 CATTAATGACAGTCTTAAAAC-GATTACAGGCAGTTTTGAAGCGTTGCAAAAATCGTGCG 45283 ||| |||||||| ||||||| ||| ||||||||| |||| ||||| || || Sbjct 1244 CATAAATGACAG-CTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTA 1186 Query 45284 CCGGCCGCTCAGATTTCAAAGTGAGCATTCACGACCCATGGGCCGCTGTGCAAAAACCAC 45343 |||||| || |||||||| || ||||| |||||||| || | |||||||||| Sbjct 1185 GCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCAC 1126 Query 45344 AAAAAGGCGTTTCTGCTTGGAACGAACCGTATAAAGGCAATTTTGGACAAATCATGGCTG 45403 ||||||| | ||| | |||||||| || || |||||||| ||||| ||| | ||| | Sbjct 1125 AAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCAC 1066 Query 45404 TAAAACGGGCAAATCCTCATTTAAAAGTGTTGCCATCGATTGGCGGCTGGACGCTGTCCG 45463 |||||| || ||| | || || | | || |||||||| || |||||||| ||| Sbjct 1065 TAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCG 1006 Query 45464 ATCCGTTTTACCATT---TGCACGATGCGGAGA-AACGCGCTTTGTTTGTGGAATCCGTG 45519 |||| || | | || | || | | ||| ||| || |||||| | || || Sbjct 1005 ATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACG----ATTTGTGCAGTCAGTA 950 Query 45520 CGCGAATTTTTAACTACGTGGAAATTTTTTGACGGAGTCGATATAGATTGGGAGTTTCCC 45579 || ||| | || |||||||| || || || || ||||| |||||||||||||| Sbjct 949 AAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCT 890 Query 45580 GGCGGCAATGGCGCCAATC----CATCGGTGGGCGATCCAGAACGCGACGGTCTCACTTA 45635 || || || || || || | | ||||| | |||||| || ||| ||| Sbjct 889 GGTGGTAAAGGTGCTAACCCTGACCTCGGTAG----CCCAGAA---GATGGTGATTGTTA 837 Query 45636 TGTAGCACTGCTGCGCGATTTGCGCGACATGCTCGATCA-ATTGGCGC-ACGAAACCGGT 45693 |||| || || || || || || ||||||||| | || || | ||| || Sbjct 836 TGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTTTCAGCTAAGAA--TGGC 779 Query 45694 CGGCGCTACGAACTGACTACGGCTATAAGCGCCGGTGACGACAAAATCGCTTTGGTAGAT 45753 | ||||| ||||| | ||||| ||| | || || |||||| | || || Sbjct 778 AAGAAATACGAGTTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGAC 719 Query 45754 TA--TCAAGACGCGCAAACTTATCTCGATCGAATCTTTTTAATGACGTATGATTTTAAAG 45811 || |||| || |||| |||| | |||| || || || |||| ||||| || |||| Sbjct 718 TACGGCAAG--GCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAAG 661 Query 45812 GCGCTTGGTCGAACTCGGATTTGGGCCATCAAACGGCCGTGTACGCGCCAGAATGGAATC 45871 | || ||||| || | | || |||||||| | |||||||||| | |||||||| Sbjct 660 GAGCCTGGTCAAATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAATC 601 Query 45872 GCGACGAGCGTTACACAGTCGACTACGCGGTGCACGTTTTGCTCGAAAAACGGGTAAAGC 45931 | | || ||||||| |||| || || | ||| | | | | | || || | Sbjct 600 CCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAATC 541 Query 45932 CTCAAAAAATCGTGCTCGGCGTGGCAATGTACGGTCGCGGCTGGACCGGAGTAATTAACT 45991 || | || || || | || || || ||||| ||||| || ||||| || || | | | Sbjct 540 CTAAGAAGATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATGATT 481 Query 45992 ATCAAGACGACAACCCGTTTACCGGCATCGCAACCGGGCCCGTGTCCGGCACTTGGGAAG 46051 | ||||| ||| || || || |||| ||| || || || || || |||||| ||| Sbjct 480 ACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAG 421 Query 46052 ACGGTGTGATCGATTA 46067 |||| ||| | || || Sbjct 420 ACGGAGTGGTTGACTA 405 >seq72952 Length=1956 Score = 170 bits (188), Expect = 1e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| ||||| || ||||||||||||||||| ||||| | || |||||| ||| || Sbjct 1494 ACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCC 1553 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || |||||| | || | | |||||||| || || || |||||||||||||| Sbjct 1554 AATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGG 1613 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | ||| ||| ||| |||| | ||| ||||| |||| ||||| ||||| || || || Sbjct 1614 ATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCTAGAGTAATGGTCTTT 1673 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| |||||||||||| |||||||| Sbjct 1674 CCAGTTAGGGTTTTAACAAAAATCTGCAT 1702 Score = 165 bits (182), Expect = 6e-36 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | ||||||||| |||| ||||| ||||||||||||||||| || || || | Sbjct 1020 CCTCCTCGCAAACGCAGTACCAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCAGAT 1079 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || | ||| || |||||| | || | | ||| ||||| || ||| Sbjct 1080 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATGAGACGTTGTTGATCTGGAGGA 1139 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||||||||| |||||| | || ||| |||| | |||||||| |||||| Sbjct 1140 ATGCCTTCTTTGTCTTG-AATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTAC 1198 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || ||||| ||||| | ||||||||||| || ||||| Sbjct 1199 TTCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1246 Score = 140 bits (154), Expect = 2e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| || ||||| || || ||||| |||||||| |||||||| | | || || Sbjct 1259 ACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCC 1318 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| |||||| | || | || || || || || |||||||| ||||| Sbjct 1319 ATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATACCTTCTTT 1378 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| || || |||| | ||||||||| ||||||| || || || || Sbjct 1379 GTCTTGGATCTTTGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTACCTCTAGGGTGAT 1438 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| || || | || |||||||| ||||||||| Sbjct 1439 GGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 1475 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || ||||| || || ||||| | || ||||||||||| ||||| || || | | Sbjct 1704 CCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAA 1763 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || | ||| ||||| || | || | | ||| ||||| || ||| Sbjct 1764 AGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 1823 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | ||| || ||| |||| | |||||||| ||||||| Sbjct 1824 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTACT 1883 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || ||||| ||||| | ||||||||||| || ||||| Sbjct 1884 TCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1930 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| || | ||| | ||||| || | ||||| ||||| ||||| || || || | Sbjct 336 CCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 395 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || || || || ||||| | || | | ||| ||||| || ||| Sbjct 396 AGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGA 455 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||||||||| | || ||| ||| |||| | |||||| || |||| ||| Sbjct 456 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCACT 515 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || |||||||| || || | || || ||||| |||||||| Sbjct 516 TCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 562 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || || | |||||| || || || ||||| ||||| || |||| Sbjct 792 CCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAT 851 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || || || ||||| ||| | || | | ||| ||||| || ||| Sbjct 852 AAAGTTCGCCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGGA 911 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||||| ||||| ||| || | || || |||| | |||||||| | || || Sbjct 912 ATACCCTCTTTATCTTG-AATCTTAGCCTTTACGTTTTCAATGGTGTCAGATGGCTCCAC 970 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| || || || || | || || |||||||| ||||| Sbjct 971 CTCTAGAGTTATGGTCTTTCCTGTAAGTGTCTTGACAAATATTTGCAT 1018 >seq6456 Length=2491 Score = 145 bits (160), Expect = 6e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||| | ||||| ||| || || | || ||||||||||| || ||||| || | Sbjct 1440 TCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCTTTTTGTATATTATAGTCTGA 1499 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || |||||||| || ||| | || | ||||| || || || || Sbjct 1500 CAGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGAGG 1559 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || ||||| || || ||| |||| || ||| |||| | ||||||||| ||| | Sbjct 1560 AATGCCTTCTTTATCCTG-AATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCA 1618 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| | ||| |||||||||||||| | ||||||||||| || ||||| Sbjct 1619 CTTCTAAAGTAATAGTTTTGCCAGTCAGTGTTTTAACAAAAATTTGCAT 1667 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| |||||| || ||||| | || ||||| || ||||| || || || | Sbjct 1669 CCACCTCTCAGACGCAGAACTAAATGTAAGGTAGATTCCTTCTGAATATTGTAGTCTGAC 1728 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| ||||| || || |||||| | || | |||||||||||| || ||| Sbjct 1729 AGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 1788 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || |||||||| || || |||||||| || ||| |||| | || |||||| ||| || Sbjct 1789 ATGCCCTCTTTATCCTG-AATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCAC 1847 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| || || ||||| |||||||| | || || ||||| || |||||| Sbjct 1848 TTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 1896 Score = 138 bits (152), Expect = 9e-28 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||| | ||||| |||||| || | || ||||| || ||||| |||||||| | Sbjct 1896 TCCACCCCTAAGACGCAACACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGA 1955 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || ||| ||| || || ||||| || ||| | || | || || || || || || Sbjct 1956 CAGCGTACGACCATCTTCTAGCTGTTTCCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGG 2015 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || ||||||||||| |||||||| || ||| |||||| || |||||| ||| | Sbjct 2016 AATCCCTTCTTTGTCTTG-AATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCA 2074 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| | || || ||||||||||| | || || ||||| || |||||| Sbjct 2075 CTTCTAATGTAATTGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 2124 Score = 129 bits (142), Expect = 5e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || || |||||||| ||||| || ||||| | | || || ||| || ||||| Sbjct 781 TGGAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTTCGTCCATCTTCAAGTTGC 840 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || ||| | ||||| || || || || || ||||| || |||||||| || |||||| Sbjct 841 TTACCGGCAAAAATCAACCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTCCTG-AATTTT 899 Query 29704 TGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || || ||| |||||| || |||||| ||||||||| | || |||||||||||||| Sbjct 900 TGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATAGTTTTGCCAGT 959 Query 29763 TAAGGTTTTAACAAATATCTGCATT 29787 | ||||| || || || |||||| Sbjct 960 CAGCGTTTTCACGAAAATTTGCATT 984 Score = 129 bits (142), Expect = 5e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || |||| | || ||||| || | || ||||| |||||||| || || || | Sbjct 984 TCCACCTCTCAGTCTTAGTACCAAGTGCAAGGTAGATTCCTTTTGAATATTGTAGTCTGA 1043 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || |||||||| || ||| | || | || || || || || || Sbjct 1044 CAGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCTGGGGG 1103 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || || || ||||| |||||||| ||| ||| |||| | || |||||| | || | Sbjct 1104 AATCCCTTCCTTATCTTG-AATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 1162 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||||||||| ||||| ||||| || | ||||| ||||| || |||||| Sbjct 1163 CTTCAAGAGTAATAGTCTTGCCGGTAAGTGTTTTCACAAAAATTTGCATT 1212 Score = 129 bits (142), Expect = 5e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||| | ||||| || || || | || ||||| |||||||| |||||||| | Sbjct 1212 TCCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCAGA 1271 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || | |||||||| || | |||| || || || || || || Sbjct 1272 CAGAGTGCGTCCATCTTCTAACTGTTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAGG 1331 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || || ||||| || |||||||| || ||| |||||| || |||||| ||| | Sbjct 1332 AATGCCTTCCTTGTCCTG-AATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCA 1390 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| | || ||||||||||| || | ||||| ||||| || |||||| Sbjct 1391 CTTCCAATGTGATAGTTTTGCCTGTCAGTGTTTTTACAAAAATTTGCATT 1440 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || |||| || || |||| || | || ||||| || ||||| || || || | Sbjct 2124 TCCACCTCTCAGCCGTAGTACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGA 2183 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || || ||| || || || || |||||| | || | |||||||||||| || || Sbjct 2184 TAGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 2243 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| |||||||| || || |||||||| || ||| |||| | || |||||| ||| | Sbjct 2244 AATGCCCTCTTTATCCTG-AATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 2302 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| || || ||||| |||||||| | || || ||||| || |||||| Sbjct 2303 CTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 2352 Score = 82.4 bits (90), Expect = 6e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||| | |||| |||||| || | || ||||| || ||||| |||||||| | Sbjct 2352 TCCACCCCTAAGGCGCAACACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGA 2411 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || ||| ||| || || ||||| || ||| | || | || || || || || || Sbjct 2412 CAGTGTACGACCATCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGG 2471 Query 29679 AATACCCTCTTTGTCTTG 29696 |||||| ||||||||||| Sbjct 2472 AATACCTTCTTTGTCTTG 2489 >seq91968 Length=4039 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 89727 GCAACTGGCCTTGCGCTTTGAAACAAAAACCTGAGCAGTTGGCGGATGCCGGtttttttt 89786 || ||||||| || |||| || ||||| ||| | | || || || || || || | Sbjct 632 GCGACTGGCCCCGCAGCATGAAGCAGAAACCCGAGGAACTCGCCGAGGCGGGATTCTTCT 573 Query 89787 ACACGGGCCAAGGCGACAAGACGATTTGTTTCTTTTGCAACGGGGGCCTTAAGGATTGGG 89846 |||| ||||| |||||||| || | || |||| || |||| || || ||||| |||| Sbjct 572 ACACCGGCCAGGGCGACAAAACTAAGTGCTTCTACTGTGACGGCGGGCTCAAGGACTGGG 513 Query 89847 AAGATGGCGATGAACCTTGGGAACAACATGCGCGCTGGTTTGATAATTGCATCTATGTTC 89906 | | | ||| | || ||||| || || ||||||||||| || ||| ||| |||| Sbjct 512 AGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGATGCGCCTACGTTC 453 Query 89907 AACTAGTAAAAGGACGCGATTACGTGCAAAATGTTATTTCGAACGCTTGCG 89957 | || ||||| || || || || ||||| || || || || | || |||| Sbjct 452 AGCTGGTAAAGGGCCGAGACTATGTGCAGAAGGTGATCACGGAGGCGTGCG 402 >seq57945 Length=292 Score = 87.8 bits (96), Expect = 1e-12 Identities = 88/112 (79%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTC 29735 |||||||| ||||||||||| |||||||| || ||| |||||| || |||||| ||| Sbjct 292 GGAATACCTTCTTTGTCTTG-AATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTC 234 Query 29736 TACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| | || || ||||||||||| | || || ||||| || |||||| Sbjct 233 CACTTCCAATGTAATCGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 182 >seq148147 Length=616 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/113 (78%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 29678 GAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736 |||| || || |||||||| |||||| | ||| ||| |||| | |||||| ||| |||| Sbjct 616 GAATGCCTTCCTTGTCTTG-AATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCA 558 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||||| | ||| || ||||| || || | ||||| || || ||||||||||| Sbjct 557 ACTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTTACGAAAATCTGCATTTT 505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384015686979927