Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq93386 95.1 2e-14 seq11492 87.8 2e-12 >seq93386 Length=4403 Score = 95.1 bits (104), Expect = 2e-14 Identities = 125/167 (75%), Gaps = 10/167 (6%) Strand=Plus/Plus Query 192954 TATCCACAAAAACCCCTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGACGATT 193011 |||||||| |||||||| || || ||| ||| | || || ||||| | ||||| || | Sbjct 2621 TATCCACACAAACCCCTGGTCACAACAAGATCTATGGAATATTTACGAT-TTAGA-GAGT 2678 Query 193012 ATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGAAG 193071 || |||||| ||| |||||||||| || || || ||||| || |||||||||| Sbjct 2679 TGCCTGCTGGTATCAATTCTATTGTTGCAATTTTATGTTACACTGGATACAATCAAGAAG 2738 Query 193072 ACAGTATTATTTTAAATAAAGCTT---CTATTGAAAGAGGATTATTT 193115 | ||| | ||||||||| |||| || ||||||||||||| ||| Sbjct 2739 ATAGTGTCATTTTAAAT---GCTTCAGCTGTTGAAAGAGGATTCTTT 2782 >seq11492 Length=3974 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/90 (82%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 51957 ACATTTAAAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAA 52016 |||||| ||||||||| | ||| |||||||||||||||||||||| || ||| Sbjct 986 ACATTTCGTATGAATTTGAGTTGCACTTCGCCATATAATGCTGATTTTGATGGCGACGAA 1045 Query 52017 ATGAATTTACATGTTCCTCAATCATATGGA 52046 |||||||||||||| |||||||| |||||| Sbjct 1046 ATGAATTTACATGTACCTCAATC-TATGGA 1074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633142276597160