Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq93386 87.8 2e-12 seq11492 86.0 8e-12 >seq93386 Length=4403 Score = 87.8 bits (96), Expect = 2e-12 Identities = 171/244 (70%), Gaps = 13/244 (5%) Strand=Plus/Plus Query 192433 CTATGGTTAAACAAGCCATTGG-GTTTA--TTCCTTGCCACAACTTAAAAACGGAAACAG 192489 |||||| ||||||||| || || || || || || | | | | | || ||| ||| Sbjct 2544 CTATGGGTAAACAAGCTATGGGTGTCTACATTACTAACTTCCATGTTAGAATGGATACAT 2603 Query 192490 TCTCTCATACATTAAATTATCCACAAAAACCACTTGTTACCACA-GATAT-TGCAAAATT 192547 | | ||| | | | |||||||| ||||| || || || ||| ||| | || || ||| Sbjct 2604 TGGCCCATGTACTCTACTATCCACACAAACCCCTGGTCACAACAAGATCTATGGAATATT 2663 Query 192548 TAATAAATTAGACGATTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATAC 192607 || | ||||| || | || |||||| ||| |||||||||| || || || || Sbjct 2664 TACGAT-TTAGA-GAGTTGCCTGCTGGTATCAATTCTATTGTTGCAATTTTATGTTACAC 2721 Query 192608 TGGCTATAACCAAGAAGACAGTATTATTTTAAATAAAGCTTC---TATTGAAAGAGGATT 192664 ||| || || |||||||| ||| | ||||||||| ||||| | ||||||||||||| Sbjct 2722 TGGATACAATCAAGAAGATAGTGTCATTTTAAAT---GCTTCAGCTGTTGAAAGAGGATT 2778 Query 192665 ATTT 192668 ||| Sbjct 2779 CTTT 2782 >seq11492 Length=3974 Score = 86.0 bits (94), Expect = 8e-12 Identities = 55/59 (93%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 50438 CATATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGA 50496 |||||||||||||||||||||| || ||||||||||||||||| |||||||| |||||| Sbjct 1017 CATATAATGCTGATTTTGATGGCGACGAAATGAATTTACATGTACCTCAATC-TATGGA 1074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626517173905920