Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq3672 89.7 7e-13 seq49548 82.4 1e-10 >seq3672 Length=3751 Score = 89.7 bits (98), Expect = 7e-13 Identities = 62/69 (90%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||| Sbjct 427 AGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 368 Query 11787 TCCCCGACG 11795 |||||| || Sbjct 367 TCCCCGCCG 359 Score = 89.7 bits (98), Expect = 7e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 425 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 366 Query 8718 CCCGACG 8724 |||| || Sbjct 365 CCCGCCG 359 Score = 82.4 bits (90), Expect = 1e-10 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 139358 CGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTATACTA 139417 || |||||| |||||||||||||||||| | |||| |||||||| | |||||||||||| Sbjct 359 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 418 Query 139418 ACGAGGATTT 139427 |||||| || Sbjct 419 CCGAGGACTT 428 >seq49548 Length=1598 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 139354 TCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTAT 139413 ||| || |||||| |||||||||||||||| ||| |||| ||| |||| | |||||||| Sbjct 503 TCCCCGACGGGGAATCGAACCCCGGTCTCCTGTGTGACATTCGGAGATACTTACCACTAT 444 Query 139414 ACTAACGAGGATTTT 139428 |||| | |||||||| Sbjct 443 ACTACCTAGGATTTT 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 650752864925680