Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq15400 197 1e-45 seq72952 96.9 3e-15 seq6456 96.9 3e-15 >seq15400 Length=3181 Score = 197 bits (218), Expect = 1e-45 Identities = 347/500 (69%), Gaps = 4/500 (1%) Strand=Plus/Minus Query 24794 GTGGCGGCGTACTTTGTCGAGTGGGGTGTGTACCCGCGCCAGTTTCCCGTCGACAAGGTG 24853 |||| || ||||| || || |||||||| || || | | || ||||| || | Sbjct 1363 GTGGGCGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATA 1304 Query 24854 CCCGCGCCCAACCTCTCGCACTTGCTCTACGGCTTTGTGCCCATCTGCGGCGGCGCGGGC 24913 || || || || | || |||||||| |||||| | ||||| |||||||| | ||| Sbjct 1303 CCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGC 1244 Query 24914 ATCAACGATGCGCTAAAAACTGTGCCG-GGCAGCTTCGAGGCGCTGCAACGATCGTGCGC 24972 || || || ||| |||| | | ||||| ||| | || |||||||| || || Sbjct 1243 ATAAATGACA-GCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAG 1185 Query 24973 CGGCCGCGCCGACTTCAAGGTGGCCATCCACGATCCGTGGGCGGCCATACAGAAACCGCA 25032 |||||| | |||||||| || | ||||||||||| ||||| || |||| ||||| || Sbjct 1184 CGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACA 1125 Query 25033 GAAAGGCGTGTCCGCGTGGAACGAGCCGTACAAGGGCAACTTTGGCCAGCTGATGGCGCT 25092 ||||| |||| | ||||||||||| ||||| |||||||||||||| | ||| | || Sbjct 1124 AAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACT 1065 Query 25093 GAAGCGCGCCTACCCGCACCTCAAAGTGCTGCCCTCGATCGGCGGCTGGACGCTGTCCGA 25152 || | ||| ||| | | || | || |||||||| || || |||||||| |||| Sbjct 1064 AAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGA 1005 Query 25153 CCCGTTCTTCCACATGCACGACAAGGCGGCGCGCCAGACG-TTTATCGACTCGGTGCAAG 25211 || |||||| | ||||| | | | | ||| ||| | | || || | | Sbjct 1004 TCCTTTCTTCTTTTTAGTTGACAAATCTAAGAG-AACACGATTTGTGCAGTCAGTAAAGG 946 Query 25212 AGTACCTCGTCACCTGGAAGTTCTTTGACGGCGTCGACCTCGATTGGGAGTTTCCCGGCG 25271 ||| ||| | || ||||| ||||| || || || || |||||||||||||||| || | Sbjct 945 AGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTG 886 Query 25272 GCAAGGGCGCCAACCCGGAC 25291 | || || || ||||| ||| Sbjct 885 GTAAAGGTGCTAACCCTGAC 866 >seq72952 Length=1956 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| |||||||| || | || ||| | ||||| |||||||| || Sbjct 366 GTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCA-TCCTCCAGCTGCTTACC 424 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || || || || || || || || || || ||||| |||| || |||| Sbjct 425 AGCGAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATC-TTGGCTT 483 Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | ||| ||||| || | |||| ||||| || || || | Sbjct 484 TAACATTTTCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTTTTCCCTGTGAGTG 543 Query 133642 TTTTTACGAAAATCTGCAT 133660 | ||||| || |||||||| Sbjct 544 TCTTTACAAAGATCTGCAT 562 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| ||||||||||| || ||| ||| | || || | Sbjct 585 AAGTGAAGGGTGGACTCTTTCTGGATATTGTAATCAGACAAAGTGCGACCA-TCTTCCAA 643 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || ||||||| ||||| ||||| || || ||||||||||| || || Sbjct 644 TTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGAATGCCTTCCTTATCCTGTAT 703 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | ||| | ||||| | || || || || | ||| | ||| || || Sbjct 704 TTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCC 763 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || | ||||| || || || ||||| Sbjct 764 TGTTAATGTTTTCACAAATATTTGCAT 790 >seq6456 Length=2491 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || ||||| ||||| || ||| | | | || || | ||| ||||| Sbjct 1243 GTAGATTCCTTTTGAATATTATAATCAGACAGAGTGCGTCCA-TCTTCTAACTGTTTGCC 1301 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581 ||| |||| |||| ||| ||||| ||||| |||||||||||||| ||| ||||| || Sbjct 1302 GGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTC-CTGAATTTTTGCCT 1360 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || || | | ||||| || | |||| |||||||| ||||| | Sbjct 1361 TAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTGCCTGTCAGTG 1420 Query 133642 TTTTTACGAAAATCTGCAT 133660 ||||||| ||||| ||||| Sbjct 1421 TTTTTACAAAAATTTGCAT 1439 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| ||||| ||||| || ||| ||| | || || ||||| || || Sbjct 1927 GTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCA-TCTTCTAGCTGTTTCCC 1985 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581 || |||| |||| ||| ||||||||||| || ||||| ||||| ||| ||||| || Sbjct 1986 TGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATCCCTTCTTTGTC-TTGAATTTTTGCCT 2044 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || || | | ||||| || | || | |||||||| ||||| | Sbjct 2045 TAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTAATTGTTTTGCCAGTCAGTG 2104 Query 133642 TTTTTACGAAAATCTGCAT 133660 | ||||| ||||| ||||| Sbjct 2105 TCTTTACAAAAATTTGCAT 2123 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512 ||||||| ||| || || ||||| |||||||| || || ||| ||| || |||| Sbjct 1690 AAATGTAAGGTAGATTCCTTCTGAATATTGTAGTCTGACA--GTGTACGTCCATCTTCGA 1747 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||||||| || || |||| || | ||||| || || || ||||| || || || ||| Sbjct 1748 GCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATC-CTGA 1806 Query 133573 TCTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||||| ||| | | |||| || || | | ||||| || | |||| || ||| Sbjct 1807 ATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGTCTTG 1866 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || ||||| ||||| ||||| Sbjct 1867 CCAGTCAGTGTCTTTACAAAAATTTGCAT 1895 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATC-GCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| ||||||||||| | || | | | | || || || ||||| || Sbjct 787 GTAGATTCTTTCTGAATATTGTAATCAGATAATGTTCGTCCA-TCTTCAAGTTGCTTACC 845 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581 || |||| | || ||| ||||| || || |||||||| ||||| ||| ||||| || Sbjct 846 GGCAAAAATCAACCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTC-CTGAATTTTTGCCT 904 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || || | | || || || | |||| |||||||| ||||| | Sbjct 905 TAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATAGTTTTGCCAGTCAGCG 964 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| |||||||| ||||| Sbjct 965 TTTTCACGAAAATTTGCAT 983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481871756602280