Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq72952 120 2e-22 seq6456 102 5e-17 seq133302 82.4 5e-11 >seq72952 Length=1956 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||| | |||||| ||||| || | |||| |||||| || || ||||| || || Sbjct 335 ACCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGA 394 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || |||| || || || || ||||| | ||| || |||||| | || Sbjct 395 GAGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGG 454 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | ||| |||||||| || || ||| ||||| ||| ||||| | ||||| Sbjct 455 AATACCCTCTTTGTCTTGGATCTTGGCTTT-AACATTTTCAATAGTGTCTGAGGGTTCCA 513 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| ||||| | || |||||||||||||||||| Sbjct 514 CTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCATA 563 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | |||||| ||||| || ||||| |||||||| ||||||||||| || Sbjct 1476 CCACCACGAAGACGTAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 1535 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||||||| || || ||||| || | |||||||||||| | || Sbjct 1536 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 1595 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| ||||| | || |||| || | || || | |||||| Sbjct 1596 ATGCCCTCTTTGTCTTGGATTTT-AGCTTTTACATTTTCAATAGTATCAGAGGGTTCCAC 1654 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || || || || |||| ||||| ||||| ||||||||| Sbjct 1655 TTCTAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATA 1703 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || ||||||||||| || ||||| || || ||||| || Sbjct 1247 ACCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGA 1306 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| || | || |||| ||||||||| |||||||| | | ||| || ||| | || Sbjct 1307 TAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGG 1366 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| || || || | || | || | ||||| || ||| | Sbjct 1367 AATACCTTCTTTGTCTTGGATCTT-TGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTA 1425 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| ||||| ||||| | || || |||||||||||||| Sbjct 1426 CCTCTAGGGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 1474 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| ||||| | || ||||| | ||| |||||||| |||||||| || || Sbjct 1703 ACCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 1762 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| || | || |||||||| || || || ||||| | ||| || |||||| | || Sbjct 1763 AAGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGG 1822 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||||| | | |||| || | ||||| | ||| | Sbjct 1823 AATGCCTTCTTTGTCTTGGATTTT-AGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTA 1881 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || ||||| || || | ||||| ||||| || |||||| Sbjct 1882 CTTCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCATA 1931 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||| |||||| | |||| || || ||| |||||||| || ||||| || || Sbjct 1019 ACCTCCTCGCAAACGCAGTACCAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCAGA 1078 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || |||||||| || || ||||| || | ||| || |||||| | || Sbjct 1079 TAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATGAGACGTTGTTGATCTGGAGG 1138 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| |||||| | | |||| || | ||||| | ||| | Sbjct 1139 AATGCCTTCTTTGTCTTGAATTTT-AGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTA 1197 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || ||||| || || | ||||| ||||| || |||||| Sbjct 1198 CTTCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCATA 1247 >seq6456 Length=2491 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| || | ||| || || || || | ||| || ||||| || || ||||| || Sbjct 1213 CCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCAGAC 1272 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || |||||| | || || || ||||| ||||| ||||||| | ||| || ||| | || Sbjct 1273 AGAGTGCGTCCATCTTCTAACTGTTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAGGA 1332 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| |||||| || | ||||| || | || || | |||||| Sbjct 1333 ATGCCTTCCTTGTCCTGAATTTT-TGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 1391 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| ||||| | ||||||||||| || ||||| Sbjct 1392 TTCCAATGTGATAGTTTTGCCTGTCAGTGTTTTTACAAAAATTTGCAT 1439 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||||| | | || | || ||||| ||||| || || |||||||| | Sbjct 755 CACCACCTCTCAGTCTGAGAACAAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCAG 814 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | ||| ||| | || || | ||| || |||||||||||||| | ||| || ||| | | Sbjct 815 ATAATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGGG 874 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||||||||| |||||| || | ||||| || | || || | ||| Sbjct 875 GAATGCCTTCTTTGTCCTGAATTTT-TGCCTTAACATTTTCTATTGTATCAGAAGCTTCT 933 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| ||||| || || | |||||| || || || ||||| Sbjct 934 ACTTCCAATGTGATAGTTTTGCCAGTCAGCGTTTTCACGAAAATTTGCAT 983 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| || | ||| ||||| || || | ||| ||||||||||| || || || || Sbjct 1441 CCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCTTTTTGTATATTATAGTCTGAC 1500 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||||||| | || || | ||||||||| |||||||| | | || || || | || Sbjct 1501 AGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGAGGA 1560 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||| || ||| || || | ||||| || | ||||| | |||||| Sbjct 1561 ATGCCTTCTTTATCCTGAATCTT-TGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCAC 1619 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || ||||| || || | ||||| ||||| || ||||| Sbjct 1620 TTCTAAAGTAATAGTTTTGCCAGTCAGTGTTTTAACAAAAATTTGCAT 1667 >seq133302 Length=1298 Score = 82.4 bits (90), Expect = 5e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||| | || | ||| || || || ||| || ||||| |||||||| || | Sbjct 438 CACCACCTCTGAGTCGGAGCACTAAGTGAAGTGTGGATTCCTTTTGAATGTTGTAGTCAG 379 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAA 33623 |||| || ||| | || ||||||||||| |||||||| ||||| Sbjct 378 AGAGGGTTCGTCCATCTTCCAATTGTTTACCGGCAAAGATCAA 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 327677053410240