Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq72952 129 1e-24 seq6456 127 5e-24 seq57945 105 2e-17 >seq72952 Length=1956 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| ||| || || |||||||| || || ||| | || ||||| |||||| Sbjct 1015 CAAATATTTGTCAAGACACTTACAGGAAAGACCATAACTCTAGAGGTGGAGCCATCTGAC 956 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| |||||| ||||||||||| ||||| || ||| || || ||| Sbjct 955 ACCATTGAAAACGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCTCCAGATCAACAA 896 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| ||||| |||||| |||||||||| | ||||| | || |||||| || Sbjct 895 CGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGGCGAACTTTATCGGACTACAACATC 836 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || || |||||||| ||||| ||||| Sbjct 835 CAAAAGGAGTCTACCCTTCATCTTGT 810 Score = 114 bits (126), Expect = 3e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || |||||||| || ||||| ||||| ||| ||||||||| | ||| Sbjct 1915 AAAACACTTACTGGAAAAACAATTACTTTAGAAGTAGAAGCCTCTGACACAATTGAAAAT 1856 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| || || ||||| |||||||| ||| || || ||| | ||||| ||| Sbjct 1855 GTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAACAACGTCTTATTTTC 1796 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | || | | || |||||| |||| ||||| ||| Sbjct 1795 GCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAACATCCAAAAAGAATCT 1736 Query 206365 ACT 206367 ||| Sbjct 1735 ACT 1733 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| ||||| | |||||||| || || || ||||||| ||| |||||| Sbjct 787 CAAATATTTGTGAAAACATTAACAGGAAAGACCATTACCCTGGAAGTAGAACCATCTGAC 728 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| |||| || ||| || || || || || ||||| ||| || ||| || Sbjct 727 ACAATCGAGAATGTGAAGGCTAAAATACAGGATAAGGAAGGCATTCCCCCAGACCAACAG 668 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || || || ||||| ||||||||||| | |||||| | |||||||| || Sbjct 667 CGTCTCATTTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAATATC 608 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||||||||| || |||||| Sbjct 607 CAGAAAGAGTCCACCCTTCAC 587 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || |||||||| || ||||| ||||| ||| ||||||||| | ||| Sbjct 1231 AAAACACTTACTGGAAAAACAATTACTTTAGAAGTAGAAGCCTCTGACACAATTGAAAAT 1172 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| || |||||||| |||||||| ||| || || ||| | || ||||| Sbjct 1171 GTAAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAACAACGTCTCATCTTT 1112 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | || | | || ||||| | || ||||| || Sbjct 1111 GCTGGTAAGCAATTGGAAGATGGTCGCACCCTATCTGACTACAATATTCAAAAAGAATCC 1052 Query 206365 ACTCTTCACCTTGT 206378 || |||||||| || Sbjct 1051 ACCCTTCACCTGGT 1038 Score = 109 bits (120), Expect = 1e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || ||||| || || ||| | ||||||||| ||||| Sbjct 1699 CAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTAGAAGTGGAACCCTCTGAT 1640 Query 206233 ACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| ||||| || ||| || ||||| ||||| || || || || || Sbjct 1639 ACTATTGAAAATGTAAAAGCTAAA-ATCCAAGACAAAGAGGGCATCCCACCTGATCAGCA 1581 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | |||||||| || || ||||| ||||||||||| | ||| | | ||||||||| | Sbjct 1580 GCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCTGATTACAACAT 1521 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||| |||||||||||| | || || | ||||| Sbjct 1520 TCAAAAAGAATCTACTCTTCACTTGGTATTACGTCTTCG 1482 Score = 102 bits (112), Expect = 2e-16 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || |||||||| ||||| ||||| || ||||||||| || ||| Sbjct 559 CAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCCTCAGAC 500 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| || ||| ||||| ||||| || ||| || || || Sbjct 499 ACTATTGAAAATGTTAAAGCCAA-GATCCAAGACAAAGAGGGTATTCCCCCAGATCAACA 441 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | || || ||||| || |||||| |||| ||||| | ||| | | || ||||| | Sbjct 440 ACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAATAT 381 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTT 206381 ||||||||||| ||| | ||| | || || Sbjct 380 TCAGAAAGAGTCCACTTTGCACTTGGTATT 351 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || ||||||||||| ||||| | || || ||| |||||| Sbjct 1471 CAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACCCTAGAGGTAGAACCATCTGAC 1412 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| |||||| ||||| |||||||| ||| || ||| || Sbjct 1411 ACTATTGAAAACGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACCAACAG 1352 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || ||||| || || ||||| || |||||||||| | || | | ||||| || | Sbjct 1351 AGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTATCTGATTATAATATT 1292 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || |||||||| || | || ||| | ||||| Sbjct 1291 CAAAAGGAATCTACTCTACATTTAGTATTGCGTCTTCG 1254 Score = 91.5 bits (100), Expect = 3e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||| ||||| |||||||| || |||| || ||||| | ||||| | ||||||||| Sbjct 810 ACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAAGTTCGCCCATCTTCC 869 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||| ||||| ||||| || ||||||||| Sbjct 870 AGCTGCTTGCCGGCAAAGATGAGACGTTGTTGA 902 >seq6456 Length=2491 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || ||||| ||||| ||||| |||||||||||| |||||| ||| | ||| Sbjct 1424 AAAACACTGACAGGCAAAACTATCACATTGGAAGTGGAAGCTTCTGATACAATAGAAAAT 1365 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||| ||||| || || ||||| ||| || ||| || || || || ||| Sbjct 1364 GTTAAGGCAAAAATTCAGGACAAGGAAGGCATTCCTCCAGACCAACAGAGGCTGATTTTC 1305 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || ||||| ||||||||| | ||| || | ||||| || | || || || ||| Sbjct 1304 GCCGGCAAACAGTTAGAAGATGGACGCACTCTGTCTGATTATAATATTCAAAAGGAATCT 1245 Query 206365 ACTCTTCACCTTGTTTTG 206382 ||| | ||| | |||||| Sbjct 1244 ACTTTGCACTTAGTTTTG 1227 Score = 111 bits (122), Expect = 4e-19 Identities = 146/201 (73%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 206179 TTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || || || || || || ||||| ||||||||||| |||||| ||| | Sbjct 2343 TTTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTGGAAGCTTCTGATACAAT 2284 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 ||| || ||| ||| ||||| || ||||| || ||| || || |||||||| Sbjct 2283 TGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCAGCAAAGACT 2224 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||| || || ||||||||| | ||||||||| | || | | || ||||| | ||||| Sbjct 2223 TATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACACTATCTGACTACAATATTCAGAA 2164 Query 206358 AGAGTCTACTCTTCACCTTGT 206378 || |||||| | ||||| || Sbjct 2163 GGAATCTACTTTGCACCTGGT 2143 Score = 107 bits (118), Expect = 5e-18 Identities = 138/189 (73%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 206179 TTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || || || || || || ||||| ||||||||||| |||||| ||| | Sbjct 1887 TTTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTGGAAGCTTCTGATACAAT 1828 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 ||| || ||| ||| ||||| || ||||| || ||| || || |||||||| Sbjct 1827 TGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCAGCAAAGACT 1768 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||| || || ||||||||| | ||||||||| | || || | || ||||| | ||||| Sbjct 1767 TATTTTTGCTGGAAAGCAGCTCGAAGATGGACGTACACTGTCAGACTACAATATTCAGAA 1708 Query 206358 AGAGTCTAC 206366 || ||||| Sbjct 1707 GGAATCTAC 1699 >seq57945 Length=292 Score = 105 bits (116), Expect = 2e-17 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 206216 AAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAA 206275 |||||||| |||||| ||| |||| |||||| |||||||||||| || ||||| | Sbjct 1 AAGTGGAAGCTTCTGATACAATCGAGAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCA 60 Query 206276 TTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTT 206335 || || || |||||||| || |||||||||||||| ||||||||||| | || Sbjct 61 TTCCTCCCGATCAACAAAGACTAATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACAC 120 Query 206336 TGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 206388 || | || || || | ||||| || || ||| | ||| | || ||| | ||| Sbjct 121 TGTCAGACTATAATATTCAGAAGGAATCGACTTTGCACTTGGTGTTGCGTCTT 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177939173474587