Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq72952 120 2e-22 seq6456 98.7 8e-16 seq91968 93.3 3e-14 >seq72952 Length=1956 Score = 120 bits (132), Expect = 2e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||||||| | ||||| || || ||||| | ||| |||| || Sbjct 1930 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACTTTAGAAGTAGAAGCCTCT 1871 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || ||||| |||||||||||| | || |||||| Sbjct 1870 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 1811 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 ||| | ||||||| |||||||| ||||| |||||| || | ||| | || |||| Sbjct 1810 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTT--CTGACTACA 1753 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 |||| |||||||||||||| | ||||||||| | | ||| |||| || Sbjct 1752 ACATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGG 1704 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||||||||| | ||||| ||||||||||| | ||| |||||| Sbjct 1702 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTAGAAGTGGAACCCTCT 1643 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| ||||| |||||||| ||| | || |||||| Sbjct 1642 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 1583 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | ||||| | ||| || || ||||| |||||| | ||| | ||||||||| Sbjct 1582 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCTGATTACAAC 1523 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || |||||||||||||| || || || ||||| Sbjct 1522 ATTCAAAAAGAATCTACTCTTCACTTGGTATT 1491 Score = 105 bits (116), Expect = 5e-18 Identities = 154/216 (71%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || |||||||| || | || || || ||||| ||| | || |||||| Sbjct 1475 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACCCTAGAGGTAGAACCATC 1416 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || || ||| | ||||| ||| || ||||||||||| | ||| || || Sbjct 1415 TGACACTATTGAAAACGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACCA 1356 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 ||| |||||||||| ||| || |||||| | |||||| | | ||||| ||||| Sbjct 1355 ACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTAT--CTGATTAT 1298 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || || ||||| |||||||| ||||||||||||||| Sbjct 1297 AATATTCAAAAGGAATCTACTCTACATTTAGTATTG 1262 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||||||| | ||||| || || ||||| | ||| |||| || Sbjct 1246 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACTTTAGAAGTAGAAGCCTCT 1187 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || |||||| |||||||||||| | || |||||| Sbjct 1186 GACACAATTGAAAATGTAAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 1127 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 ||| | || || | ||| || || ||||| |||||| || | |||| || |||| Sbjct 1126 CAACGTCTCATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTAT--CTGACTACA 1069 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 | || ||||||||||| || || || | ||| || | || |||||||| Sbjct 1068 ATATTCAAAAAGAATCCACCCTTCACCTGGTACTGCGTTTGCGAGGAGG 1020 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| |||||||| || || |||||||||||| ||||| |||||| Sbjct 790 ATGCAAATATTTGTGAAAACATTAACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 731 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | ||||| ||||| || || |||||| | ||| || ||| Sbjct 730 GACACAATCGAGAATGTGAAGGCTAAAATACAGGATAAGGAAGGCATTCCCCCAGACCAA 671 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | || |||| ||| || || ||||| |||||| | ||| || |||||||| Sbjct 670 CAGCGTCTCATTTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 611 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||| || || || || || ||| | | | |||||||| Sbjct 610 ATCCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGG 564 >seq6456 Length=2491 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| |||||| |||| ||||| || || || ||||| ||| | Sbjct 1440 AATGCAAATTTTTGTAAAAACACTGACAGGCAAAACTATCACATTGGAAGTGGAAGCTTC 1381 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | | | | || || ||||||| ||||| |||||| | || || || Sbjct 1380 TGATACAATAGAAAATGTTAAGGCAAAAATTCAGGACAAGGAAGGCATTCCTCCAGACCA 1321 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| ||||| |||| || |||||||| ||||||||| ||| || ||||| || Sbjct 1320 ACAGAGGCTGATTTTCGCCGGCAAACAGTTAGAAGATGGACGCACTCTGTCTGATTATAA 1261 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || ||||| |||||||| | || ||||| ||| Sbjct 1260 TATTCAAAAGGAATCTACTTTGCACTTAGTTTTG 1227 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| || ||| ||||||||||||| || || ||||| ||| | Sbjct 1896 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTGGAAGCTTC 1837 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || || ||||||| || ||||| ||| | ||| ||||| Sbjct 1836 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 1777 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||||| ||||||| ||| || || || | |||||| || || || ||||| Sbjct 1776 GCAAAGACTTATTTTTGCTGGAAAGCAGCTCGAAGATGGACGTACACTGTCAGACTACAA 1717 Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468 || || || |||||||| |||||||||| Sbjct 1716 TATTCAGAAGGAATCTACCTTACATTTAGT 1687 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| |||||| | || |||||||| ||||| | ||| || || Sbjct 1212 AATGCAAATTTTTGTGAAAACACTTACCGGCAAGACTATTACTCTTGAAGTTGAGCCTTC 1153 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || ||| ||||||| || || ||||| | ||| || || Sbjct 1152 TGATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGGATTCCCCCAGACCA 1093 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| |||||||||| ||| || |||||| | |||||| || || || ||||| Sbjct 1092 ACAGAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAA 1033 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || ||||| |||||||| | || || ||| | || | |||| ||| Sbjct 1032 TATTCAAAAGGAATCTACCTTGCACTTGGTACTAAGACTGAGAGGTGGA 984 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||| || ||||| |||||||||| || || || ||||| |||| | Sbjct 984 AATGCAAATTTTCGTGAAAACGCTGACTGGCAAAACTATCACATTGGAAGTAGAAGCTTC 925 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | | | | || || ||||||| |||||||||||| | ||| || || Sbjct 924 TGATACAATAGAAAATGTTAAGGCAAAAATTCAGGACAAAGAAGGCATTCCCCCAGACCA 865 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 ||| ||| | |||| ||| || || ||| | |||||| | || | ||| |||||| Sbjct 864 ACAGAGGTTGATTTTTGCCGGTAAGCAACTTGAAGATGGACGAACATTAT--CTGATTAC 807 Query 106437 AACATACAAAAAGAATCTACACTACA 106462 || || || ||||||||||| || || Sbjct 806 AATATTCAGAAAGAATCTACTCTCCA 781 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/200 (70%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| || ||| ||||||||||||| || || ||||| ||| | Sbjct 2352 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTGGAAGCTTC 2293 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || || ||||||| || ||||| ||| | ||| ||||| Sbjct 2292 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 2233 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 ||||| ||||||| ||| || || || | |||||| | | ||||| || ||| Sbjct 2232 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACACTAT--CTGACTAC 2175 Query 106437 AACATACAAAAAGAATCTAC 106456 || || || || |||||||| Sbjct 2174 AATATTCAGAAGGAATCTAC 2155 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| || ||| |||||||||| || ||||| | ||| ||| | Sbjct 2124 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACAATTACATTAGAAGTGGAAGCTTC 2065 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | | | | || || ||||||| ||||||||||| | || || || Sbjct 2064 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGGATTCCTCCCGACCA 2005 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| |||||||||| ||| || ||||| |||||||| | || || ||||| || Sbjct 2004 ACAGAGGCTTATTTTTGCAGGGAAACAGCTAGAAGATGGTCGTACGCTGTCAGATTATAA 1945 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || || || ||||| || | || || || ||| Sbjct 1944 TATTCAGAAGGAATCAACTTTGCACTTGGTGTTG 1911 >seq91968 Length=4039 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 99638 AACGGGTTTTATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGAA 99697 ||||| || ||||| |||| |||| || ||||| |||||||||||||| ||||| ||| Sbjct 933 AACGGCTTCTATTACCTGGGCCGCGGTGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 874 Query 99698 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCAA 99757 || ||| ||| | | ||||||||| || || || || |||| |||||||| || Sbjct 873 ATTATGAAATGGGTCGCGGGCGACGATCCCGCCAAGGACCACCAACGGTGGGCGCCCCAG 814 Query 99758 TGCCCGTTTATGCAGC 99773 ||||| || ||| || Sbjct 813 TGCCCCTTCCTGCGGC 798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401072630170976