Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq515 134 2e-25 seq66299 91.5 2e-12 >seq515 Length=5297 Score = 134 bits (148), Expect = 2e-25 Identities = 172/234 (74%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| |||||||| || || ||||| |||| |||| |||| |||| | Sbjct 911 ATCTACAAAGTGCTCAAACAAGTCCACCCGGACACCGG-----CATC-TCCAGCAAGGCG 858 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| |||||||||||||| || |||||||| |||| ||||||| | ||||||| || Sbjct 857 ATGTCCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCCGCCGAGGC--GT 800 Query 725031 CGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 ||| || || | || ||||||| | ||||||| | | ||| | |||||| | | Sbjct 799 CGCGACTAGCCCACTACAACAAGAGGTCCACGATCACGTCCAGGGAGGTGCAGACCTCAG 740 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | || | ||| |||||| |||||| |||||||||| ||| ||||||| Sbjct 739 TGAGGCTCCTGTTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGCGAAGGCACCA 686 >seq66299 Length=865 Score = 91.5 bits (100), Expect = 2e-12 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || ||||| ||| | |||||||| ||||| || |||| ||| || | ||| || Sbjct 498 ATTTACAAAGTGTTGAAGCAGGTTCACCCGGACAC---TGGG--ATC-TCGAGTAAGGCC 445 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| || ||||| || ||||||||||| || | || || |||| ||||||| Sbjct 444 ATGTCTATAATGAATTCCTTTGTCAACGATATTTTTGAACGTATCGCGGCCGAGGCGTCC 385 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| || ||||||| | |||||| || | || | |||||| |||| Sbjct 384 CGCCTGGCGCACTACAACAAGAGGTCAACGATCACGTCGAGGGAAGTGCAGACCTCCGTC 325 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || || || | | |||||| || || | ||||| || |||||| || Sbjct 324 CGTCTCCTCCTTCCCGGCGAGCTCGCAAAACACGCGGTGAGCGAGGGAAC 275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7153086060684214