Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq6456 109 5e-19 seq72952 102 7e-17 >seq6456 Length=2491 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| | || | ||| || || || || ||| ||||||||||| || ||||| | Sbjct 1211 TTCCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCAG 1270 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || || || | || || | ||| || || || || |||| || ||| ||||| | || Sbjct 1271 ACAGAGTGCGTCCATCTTCTAACTGTTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAG 1330 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 ||| || ||||||||| ||| ||||| ||| | | || | | || || | |||| Sbjct 1331 GAATGCCTTCCTTGTCC-TGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 1389 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || |||| ||||| ||||| || |||| ||||| ||||| || ||||||| Sbjct 1390 ACTTCCAATGTGATAGTTTTGCCTGTCAGTGTTTTTACAAAAATTTGCATTC 1441 >seq72952 Length=1956 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| || ||||||| ||| ||||||||||| || ||||| | Sbjct 1248 CCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGAT 1307 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || ||||| || || || ||||| || | || ||| ||||| | ||| Sbjct 1308 AGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGA 1367 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || ||||| ||||||| ||||| || | | ||||| | ||| ||| Sbjct 1368 ATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTACC 1427 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || | ||||| ||||| || || | ||| || ||||| |||||||||| Sbjct 1428 TCTAGGGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATTC 1476 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || || |||||||| | ||| || || | || |||| |||||||| ||||| Sbjct 599 CTCTTTCTGGATATTGTAATCAGACAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAA 658 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||| | |||| || ||||| ||| || || ||||| | | Sbjct 659 AATGAGACGCTGTTGGTCTGGGGGAATGCCTTCCTTATCCTGTATTTTAGCCTTCACATT 718 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | ||| || |||| || || || || || || || |||||||| Sbjct 719 CTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCCTGTTAATGTTTTCAC 778 Query 35725 AAATATCTGCAT 35736 |||||| ||||| Sbjct 779 AAATATTTGCAT 790 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | || ||||| || | ||| || ||||||||||||||||| | Sbjct 1474 TTCCACCACGAAGACGTAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAG 1533 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || | || |||| |||||||| ||||| || | |||||||| || | | Sbjct 1534 AAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTG 1593 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 | | || ||| ||||| ||| ||| || || | | || | | || || | |||| Sbjct 1594 GGATGCCCTCTTTGTCTTGGAT-TTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCC 1652 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || || || || || || | ||||| ||||| |||||||| Sbjct 1653 ACTTCTAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449349105162760