Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq42954 583 1e-161 seq188143 95.1 2e-14 seq181590 93.3 6e-14 >seq42954 Length=2876 Score = 583 bits (646), Expect = 1e-161 Identities = 1110/1614 (69%), Gaps = 29/1614 (2%) Strand=Plus/Plus Query 68356 ATTTTATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAG 68415 |||||| | || || | ||||||||||| | | ||| |||||||| |||| ||| Sbjct 522 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAG 581 Query 68416 TACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAA 68475 ||||| || ||||| | ||| | |||| ||| |||||| || |||||||| | Sbjct 582 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 641 Query 68476 TAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTA 68535 || | || | || | ||| || || | ||||||||||| || || || ||||||||| Sbjct 642 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCTCCTCTA 701 Query 68536 TCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTT--AAAAATCT 68593 || || ||||| | ||| | || | | ||| ||||| | || || | |||||| Sbjct 702 TCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 761 Query 68594 GTTTGATATCATCTGGAAGGCTCGTATTTT---GAATGGATCCACCATCGGATATAATTA 68650 || || || | || | | | ||| | || |||||| | | ||||||| | Sbjct 762 CTT--ATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 819 Query 68651 TATTCTTGATCTCATCATTCCACAATTTTCTCTCC-GTTAAAACTCTAAGGAGATGCGGA 68709 ||| || || || |||| ||| || | ||| || ||| | | || ||||| | Sbjct 820 GATTTTTCATATCTTCATCCCATAAATCAG-CTCGAGTCAAATCAGTCAGAAGATGATGG 878 Query 68710 TTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGT 68769 || |||| ||||||| |||||||| ||||| | ||||||||| ||| ||||| Sbjct 879 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGT 938 Query 68770 TCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACC 68829 || | ||||||| | || || |||||||| ||||| || ||||| ||||||||||| | | Sbjct 939 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATC 998 Query 68830 AATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAA 68889 |||| | ||| | | ||||||| || || || ||||| || |||| |||||| Sbjct 999 AATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGTCCAGTCCCAA 1058 Query 68890 AGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGAT 68949 || || | || ||||| | ||| || || || || || | || || | Sbjct 1059 AGGTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTT 1118 Query 68950 CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCA 69009 || | |||||| || | ||||| | ||| |||| ||||||||| || ||||||||| Sbjct 1119 CCTTGATATGTGCTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCA 1178 Query 69010 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAAT 69069 || |||||||||||||| || || | | ||| || | ||||| ||| ||| | Sbjct 1179 CCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAA 1238 Query 69070 GGATAATGTAAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCT 69128 || || | | | | | ||||| |||||||| |||||||| |||||||||| ||| | Sbjct 1239 GG-TATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGACAGGACG 1297 Query 69129 ATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 69188 || ||| |||||||| ||| ||||| || | ||||||| | |||| ||| || | ||| Sbjct 1298 GTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTT 1357 Query 69189 ATTAAGATTTCGGACT-ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTC 69247 || | ||| | || | || | ||| | || |||| ||| ||||| |||||| Sbjct 1358 GTTTAAATT-CTGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAAAATTAAATCGAT 1416 Query 69248 CATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCAT--T 69305 || | ||||||||| || ||||||| || || || || || ||||| || |||| | Sbjct 1417 TATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTT 1476 Query 69306 AGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATT 69365 | || ||||| | | ||| || || ||||| |||||||| ||||| || ||||| Sbjct 1477 CTGAAGTG--TATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATT 1534 Query 69366 TTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTC 69425 || ||||||||||| |||| || || ||||| || | ||| | || |||||||| || Sbjct 1535 TTTTTGATTACTCTTCCTGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGTCTC 1594 Query 69426 AATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACG-GTCTTGTAA- 69483 | |||| ||| ||||| || ||||| | || || | | | | || || || ||| Sbjct 1595 CACTTGAGCTTCTATAATTGACTTCCATA--ACTCTTG-AGCTCTGACTCGTTTTATAAA 1651 Query 69484 -CGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATC 69542 || || |||| |||||||| | |||||| ||||||||| ||||| || ||| | Sbjct 1652 CCGTTTTTCTTCTTCATATTTGGCATATAGTGCTTCGAATTCCTCTCCGTAACAGTCAGC 1711 Query 69543 CAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACT---CG 69599 | |||||||| |||| |||||||| | ||| || ||| |||||||| || | Sbjct 1712 GAGGCCAGGACAATCATGAGGACACATGA--GACTCCA-ATCTTCATCCTTTTCTACCCT 1768 Query 69600 TTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659 ||||||||| ||||| || ||||| | ||| ||| || ||||| | ||| ||||||| Sbjct 1769 TTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTC 1828 Query 69660 ATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 69719 || ||||| || ||||| | ||| | ||||| | || || | |||||| || |||| Sbjct 1829 CTTACCTGTGTTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAA 1888 Query 69720 ATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTT 69779 || || || | | || || ||||| ||||| || ||||||| ||||||||||| || Sbjct 1889 GTAAATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATT 1948 Query 69780 ATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATA 69839 || || ||||||| ||| || | | |||||| || ||||| || |||| ||||| Sbjct 1949 GTTGTACACTCTCAACATTGGCACTAGACCATTTGAAACCCCATTAGTGCCAGCTATATA 2008 Query 69840 ACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGAT 69899 | || || | ||| | || || |||||| || || || |||||| || Sbjct 2009 AGACCCCTGGGCTCTAATGCAATGTGTATGTAAACCTATGCCACCGGCAGATTTAGAAAT 2068 Query 69900 TAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 || ||||| |||| || || || | ||||| || || ||||| ||| |||| Sbjct 2069 TAATGCACATTGTTTTAAAGTATCGAAAATACCTTCAATACTATCGTCTTTCAT 2122 Score = 104 bits (114), Expect = 3e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194 ||||| ||||| ||||||| |||||| |||||| ||||||||| ||||||||||||||| Sbjct 2584 TTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 2643 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244 ||| ||||| || |||| ||| |||| | || ||| ||||| | ||| Sbjct 2644 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 2693 >seq188143 Length=771 Score = 95.1 bits (104), Expect = 2e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162 || |||| ||||||||||| || ||||||||||| || || || ||||||||||| | | Sbjct 481 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTGTACATCTGC 540 Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAATC 40199 ||||| || ||||||| ||||| || ||||| |||| Sbjct 541 CATATGTCTGGATATTGAATTGGGAATATAACGAATC 577 >seq181590 Length=632 Score = 93.3 bits (102), Expect = 6e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 70345 TTTTTTGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCA 70404 || || || || || |||||||| ||||| ||||||||||| || | ||| ||||| ||| Sbjct 603 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 544 Query 70405 GGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTT 70464 ||||| | ||| || ||||||||| ||||| ||||||| |||| | || |||| Sbjct 543 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 484 Query 70465 GTAACTCCGTTATATA 70480 || || || ||||| Sbjct 483 GTTACACCAGAATATA 468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 684707712373080