Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq93386 102 6e-17 seq188143 93.3 3e-14 seq89961 84.2 2e-11 >seq93386 Length=4403 Score = 102 bits (112), Expect = 6e-17 Identities = 111/145 (77%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090 ||| |||||||| ||||| | |||||| ||||||||||| | |||||| ||| || || Sbjct 3298 AATTGTCATACGAGAAGGGATAGCATGGGGATTAATAATGATATCTGGCGTTAAGCCCTC 3239 Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCG-TACATCATTCCACAAGTTCCTTTTTGAGCGG 115149 | ||| |||||||| || | || ||| ||| |||||||| |||||||||||| || Sbjct 3238 GCATGTAAACGGCATATCTTCTTG-TCGATACTGGATTCCACATGTTCCTTTTTGACCGT 3180 Query 115150 TAAACGATGCAAATTTATCACCAAT 115174 | || ||||| ||||| ||||| Sbjct 3179 GACGAGAAGCAAACTTATCCCCAAT 3155 >seq188143 Length=771 Score = 93.3 bits (102), Expect = 3e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 43709 TTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGG 43768 || ||||||||||||| ||||||||||| |||||||||||||| | || || |||||| Sbjct 566 TTCCCAATTCAATATCCAGACATATGGCAGATGTACAAAAAAGCTGAAGCATCGTTTTGG 507 Query 43769 ACAGCAGAAGAAGTTGATTTGACTAA 43794 || ||||||||||| || || |||| Sbjct 506 ACTGCAGAAGAAGTAGACTTATCTAA 481 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 43796 GACTTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTAT--ATCTTTGGTTT 43853 ||||| ||| ||||| |||||||| || ||||||||||| | | | || | Sbjct 359 GACTTGGCAGATTGGGAGACATTAAAAGATTGCGAGAAACATTTTATCAAACAT--GTCT 302 Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913 | || || ||||| || || || || || ||||| || ||||| || || ||| Sbjct 301 TAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTTTCTCGC 242 Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 |||| |||||| | | ||||| | || || ||||| ||||||||||| || |||||| Sbjct 241 AAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAAATG 182 Query 43974 TTCATTCGGAAAT 43986 |||||||||| || Sbjct 181 TTCATTCGGAGAT 169 >seq89961 Length=1304 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 |||||||||||||||||||| |||| || | |||||||| ||| || |||| ||| Sbjct 149 CCCAAAATTGTAAATGGTCCACAAATTTTGGACAAATATGTCGGTGAAAGTGAAGCGAAT 90 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACG 19529 | | | ||||||||||| |||||||||||| | ||||| Sbjct 89 ATTAGGAGATTGTTTGCTGATGCTGAAGAAGAAGAGAAACG 49 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396214256413735