Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq42954 107 2e-18 >seq42954 Length=2876 Score = 107 bits (118), Expect = 2e-18 Identities = 659/1049 (63%), Gaps = 25/1049 (2%) Strand=Plus/Minus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| || || ||||| | ||| | || |||| || |||||||| |||||||||||| Sbjct 2296 GAAAGACCTCAACACATGCTTATGAGAGTCTCCATAGGCATTCATGGTGAAGACATTGAT 2237 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 104334 || | | || || | | |||||| | | ||| || | || |||| || || Sbjct 2236 AGTGCAATCAATACTTATAATATGATGTCAGAGAAATATTTT-ACACATGCAAGCCCTAC 2178 Query 104335 CCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAA 104394 || ||| |||| |||||| | || || | ||| ||||||||||| || | || Sbjct 2177 ACTGTTCTCAGCTGCTACACCGCGGCCACAGCTTTCCTCCTGCTTCCTTATAGCTATGAA 2118 Query 104395 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 104454 || || || | ||||| | | ||| | | | ||||| ||| || || | Sbjct 2117 AGACGATAGTATTGAAGGTATTTTCGATACTTTAAAACAATGTGCATTAATTTCTAAATC 2058 Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514 || || || || || | || | ||| | |||||| | ||| ||| || Sbjct 2057 TGCCGGTGGCATAGGTTTACATACACATTGCATTAGAGCCCAGGGGTCTTATATAGCTGG 1998 Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || ||||| ||| ||||| | | |||||| | | || | ||| || || | Sbjct 1997 CACTAATGGGGTTTCAAATGGTCTAGTGCCAATGTTGAGAGTGTACAACAATACTGCCAG 1938 Query 104575 CTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCAT 104630 |||||| |||||| ||| | || | || | | ||| | || | ||||| | Sbjct 1937 ATATGTAGATCAAGGTGGAAA-CAAACGTCCCGGTGCATTTGCAATTTACTTAGAGCCTT 1879 Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690 |||| ||||| || | |||||| | || || ||| |||| | || || | Sbjct 1878 GGCATGCGGACATATTTGAGTTCTTAGATTTAAAAAAGAACACAGGTAAGGAAGAAATGA 1819 Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | | || || || | ||| | ||||| |||||||| || ||||| || || || Sbjct 1818 GAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGATCTGTTTATGAAAAGGGTAGAAA 1759 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG- 104809 || || ||||| |||| | ||||| | | ||||| ||| | || | || Sbjct 1758 AGGATGAAGATTGGAGTCTCATGTGTCCTCATGATTGTCCTGGCCTCGCTGA--CTGTTA 1701 Query 104810 -GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC 104868 || ||||| || ||||| || || | || || || |||||| ||| | | || Sbjct 1700 CGGAGAGGAATTCGAAGCACTATATGCCAAATATGAAGAAGAAAAACGGTTTA-TAAAAC 1642 Query 104869 G-GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927 | || |||| || | ||||| | ||| | | ||||| ||||||||||||| Sbjct 1641 GAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAGAAGCTCAAGTGGAGACTGGTACAC 1582 Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987 |||| ||| | || || || || || ||| |||||||||||||| ||| | || | Sbjct 1581 CATATATGTTGTATAAGGATGCTTGCAACAGGAAGAGTAATCAAAAAAATCTTGGCACTA 1522 Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047 | || || |||||| || || || | || ||| || ||||||| ||| | Sbjct 1521 TTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAG 1462 Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG 105107 |||| ||||| || || || || || || || ||| || | || |||| Sbjct 1461 TGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGT------TGAAAATAATCGATTTA 1408 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 ||| | ||||| | | ||| | || || | ||| || | || |||||| ||| |||| Sbjct 1407 ATTTTAAAAAATTAAAAGAAATCACTAAGATTGTGACTCAGAATTTAAACAAAGTCATTG 1348 Query 105168 ATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 105224 || || ||||| || || ||| || | || |||||||| |||||||| Sbjct 1347 ATGTTAACTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATATGAGGCACCGTCCTG 1291 Query 105225 TTGGTCTCGGTGTTCAGGGTCTCGCGGAT 105253 | ||| | |||||||||||| | || ||| Sbjct 1290 TCGGTATTGGTGTTCAGGGTATGGCAGAT 1262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581391835546280