Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq72952 168 2e-36 seq6456 138 3e-27 seq57945 109 1e-18 >seq72952 Length=1956 Score = 168 bits (186), Expect = 2e-36 Identities = 170/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || || | ||| ||||| ||||| || ||||| ||||||||||| || |||| | || Sbjct 798 CGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAAGTT 857 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||||||||||||||||| || ||||| || |||||||| || ||||||| || Sbjct 858 CGCCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGGAATACCC 917 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || || || || ||||| || |||||||| ||||||||||| || ||||| ||| Sbjct 918 TCTTTATCTTGAATCTTAGCCTTTACGTTTTCAATGGTGTCAGATGGCTCCACCTCTAGA 977 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| || || ||||| ||||| | ||||| Sbjct 978 GTTATGGTCTTTCCTGTAAGTGTCTTGACAAATATTTGCAT 1018 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || ||||| || || ||||| || |||||||| | || || | ||||||||||| || Sbjct 1272 TGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCCATCTTCCAGTTGT 1331 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || || ||||| | |||||||| || |||| ||||| ||||| ||||||||| Sbjct 1332 TTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGGATCTTT 1391 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||||||||||| || |||||||| ||| ||||| || ||||| || ||||| || Sbjct 1392 GCCTTCACGTTTTCAATAGTGTCAGATGGTTCTACCTCTAGGGTGATGGTTTTTCCTGTA 1451 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 |||||||| ||||| | ||||||| Sbjct 1452 AGAGTCTTAACAAAGATCTGCATT 1475 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || |||||||||||||| || || | ||| || | |||||||||| |||||||| Sbjct 1733 AGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTCCAATTGCTTGCC 1792 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 ||||| ||||| |||||||| || ||||||| ||||| ||||| ||||| || || Sbjct 1793 CGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTT 1852 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || ||||| || ||||||||| ||| || || | ||| || || ||||| || || || Sbjct 1853 TACATTTTCAATTGTGTCAGAGGCTTCTACTTCTAAAGTAATTGTTTTTCCAGTAAGTGT 1912 Query 211097 CTTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 1913 TTTAACAAAAATTTGCAT 1930 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | |||||||||||| || || || || || | || || | ||||| |||||||| Sbjct 359 GTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCCAGCTG 418 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || ||||| || || |||||||| || || |||| || || ||||| |||||||| Sbjct 419 CTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTT 478 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || ||||| || ||||| ||| ||| || || | ||||| || || || || Sbjct 479 GGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTTTTCCCTGT 538 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||||||||| | |||||| Sbjct 539 GAGTGTCTTTACAAAGATCTGCAT 562 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| ||||||||||| ||||| || ||||| | | || | |||||| Sbjct 579 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAATCAGACAAAGTGCGACCATCT 638 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||| || || || || || || |||||||| || |||| |||||||| ||| Sbjct 639 TCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGAATGCCTTCCTTATCC 698 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || ||||| || ||||| |||||||| ||| || || || || || ||| Sbjct 699 TGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTC 758 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || | || || ||||| | ||||| Sbjct 759 TTTCCTGTTAATGTTTTCACAAATATTTGCAT 790 >seq6456 Length=2491 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||| || |||||||| || ||||| || | || || | ||||||||| || || Sbjct 1464 GTGCAAAGTAGATTCTTTTTGTATATTATAGTCTGACAGTGTGCGTCCATCTTCAAGTTG 1523 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || ||||| || ||||| | ||||||||||||||||| ||||| || ||||| ||||| Sbjct 1524 TTTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTT 1583 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | || || |||||||| |||||||| ||| || || | ||| || || || || || Sbjct 1584 TGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAAGTAATAGTTTTGCCAGT 1643 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| | ||||| Sbjct 1644 CAGTGTTTTAACAAAAATTTGCAT 1667 Score = 131 bits (144), Expect = 4e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||| || || ||||| || |||||||| | || || | ||||||||| | ||| Sbjct 1236 GTGCAAAGTAGATTCCTTTTGAATATTATAATCAGACAGAGTGCGTCCATCTTCTAACTG 1295 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||||| ||||| || || | |||||||| ||||||| |||||||||||||| || || Sbjct 1296 TTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATTTT 1355 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | || || ||||| || || ||||| ||| || || | ||||| || || || || Sbjct 1356 TGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTGCCTGT 1415 Query 211091 GAGAGTCTTTACAAACACCTGCATT 211115 || || |||||||| | |||||| Sbjct 1416 CAGTGTTTTTACAAAAATTTGCATT 1440 Score = 120 bits (132), Expect = 7e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 210902 TAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATC 210961 ||| || ||||| | ||| || || || || || || || || | || || | |||||| Sbjct 2139 TAGTACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGATAGTGTACGTCCATC 2198 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 ||| |||||||| || || || ||||| | ||| || || || |||| || || || || Sbjct 2199 TTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATC 2258 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||| || ||| || || ||||| || || ||||| ||| || || || ||||| || Sbjct 2259 CTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGT 2318 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||| || || || ||||||||||| | |||||| Sbjct 2319 CTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 2352 Score = 118 bits (130), Expect = 2e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||| || || || || || |||||||| | || || | |||||||| ||||| Sbjct 1920 GTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCATCTTCTAGCTG 1979 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || ||||| || ||||| | |||||||| ||||||| ||||| ||||| || || || Sbjct 1980 TTTCCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATCCCTTCTTTGTCTTGAATTTT 2039 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | || || ||||| || || ||||| ||| || || | || || || || || || Sbjct 2040 TGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTAATTGTTTTGCCAGT 2099 Query 211091 GAGAGTCTTTACAAACACCTGCATT 211115 || ||||||||||| | |||||| Sbjct 2100 CAGTGTCTTTACAAAAATTTGCATT 2124 Score = 109 bits (120), Expect = 1e-18 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || || || || || || || | || || | ||||||||| |||||||| || Sbjct 1699 GTAGATTCCTTCTGAATATTGTAGTCTGACAGTGTACGTCCATCTTCGAGCTGCTTTCCA 1758 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || ||||| | ||| || || || |||| || || || ||||| || ||| || Sbjct 1759 GCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTA 1818 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || ||||| || || ||||| ||| || || || ||||| ||||| || || || ||| Sbjct 1819 ACATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTC 1878 Query 211098 TTTACAAACACCTGCATT 211115 |||||||| | |||||| Sbjct 1879 TTTACAAAAATTTGCATT 1896 >seq57945 Length=292 Score = 109 bits (120), Expect = 1e-18 Identities = 118/155 (76%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||| || || || || || ||||| || | || || | |||||||||||| || Sbjct 158 GTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGACAGTGTGCGTCCATCTTCCAGTTG 99 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || ||||| || || | |||||| || ||||||| ||||||||||| || ||||| Sbjct 98 CTTTCCGGCGAAAATTAGTCTTTGTTGATCGGGAGGAATGCCTTCCTTGTCTTGAATCTT 39 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAG-AGCTTTCA 211064 | || ||||| ||||| || |||| ||||| || Sbjct 38 TGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1155344827922655