Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq70052 104 2e-17 seq72952 89.7 4e-13 seq6456 87.8 2e-12 >seq70052 Length=3604 Score = 104 bits (114), Expect = 2e-17 Identities = 222/328 (68%), Gaps = 4/328 (1%) Strand=Plus/Minus Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774 ||||||| | ||||| |||||| | ||||| | |||||||| |||| | | Sbjct 1362 AATTTGACAAATACAATGATTACATTGTGGCCTTAAATTATTTTGATTCAAAGGCTATCA 1303 Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAAATTGTGCAGCGCCAAAAAGTGGA 14834 | ||||| | ||||||||||| ||||| |||||||| | || | ||||| |||| Sbjct 1302 AATACAATAAGGGTTTGTTTTATTATGTACTGTGGAAGATATGTGATGGTAAAAAATGGA 1243 Query 14835 TGAACCAAAATGTGCTTGACCAATT--TTGGAAATACGTTAAACTTCGCTTACAAAACAC 14892 || ||| |||||| | || |||| | | ||| ||| | | |||| || || Sbjct 1242 TGGACCGAAATGTTGTAGAAAAATTCAAAGAATATATGTTGAGGCGTG-TTACCGAA-AC 1185 Query 14893 TACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTACT 14952 | |||| | | ||||| | || |||||| ||||||| || |||| ||||| | Sbjct 1184 AAAATGCTATATTGGTCTGACCTCTCTTCCTTTGGACCCCTTAATACAAACGTCACTGCC 1125 Query 14953 AACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATTACA 15012 |||| || ||||| ||||| || | || || ||||||||||| |||| | | | Sbjct 1124 TGCAGCGCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATGACGTGTA 1065 Query 15013 TTACACCAATGAAAGACTGCGACTTTAT 15040 |||| |||| ||||| ||| | |||| Sbjct 1064 TTACTCCAAAGAAAGGTTGCAAAATTAT 1037 >seq72952 Length=1956 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 ||||| ||||| || || || |||||||| || || ||||| | ||| || || | Sbjct 1488 CGTAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTGCGACCA 1547 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTT 39188 || || | || || || ||||| |||||||||||||| || |||||| | || |||||| Sbjct 1548 TCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG-ATGCCCTCTTT 1606 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 ||| |||||| ||| | | | | ||||| | ||||| || | || || Sbjct 1607 GTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCTAGAGTAAT 1666 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| || || ||||||||||| || ||||| Sbjct 1667 GGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1702 >seq6456 Length=2491 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 ||||| || ||||| ||||| | | ||||||| | || ||||| || || || ||||| Sbjct 793 TCTTTCTGAATATTGTAATCAGATAATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAA 852 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || | | ||| ||||| | ||| | || ||||||||| ||| ||| || | | | | Sbjct 853 ATCAACCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTCC-TGAATTTTTGCCTTAACATT 911 Query 39214 GCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | ||||| | || || |||| |||||| |||| || ||||||||||| || Sbjct 912 TTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATAGTTTTGCCAGTCAGCGTTTTCAC 971 Query 39273 AAAGATTTGCAT 39284 || |||||||| Sbjct 972 GAAAATTTGCAT 983 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || ||||| ||||||||||| | || || ||| | || || | ||||||||| || || Sbjct 1249 TCCTTTTGAATATTATAATCAGACAGAGTGCGTCCATCTTCTAACTGTTTGCCGGCGAAA 1308 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGT 39212 || || | ||| ||||| | || | || || |||||| ||| ||| || || | | Sbjct 1309 ATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTCC-TGAATTTTTGCCTTAACATT 1367 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | ||||| | ||||| |||| |||||| |||| || ||||| ||||| || Sbjct 1368 TTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTGCCTGTCAGTGTTTTTAC 1427 Query 39273 AAAGATTTGCAT 39284 ||| |||||||| Sbjct 1428 AAAAATTTGCAT 1439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428203601152811