Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq6456 152 1e-31 seq72952 143 6e-29 seq393 127 5e-24 seq91159 120 7e-22 seq57945 105 2e-17 >seq6456 Length=2491 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| || |||||||||||||| |||||||| || | ||||||||| | || |||| Sbjct 766 AGTCTGAGAACAAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTTCGT 825 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| || ||||| || || || || | | |||||||| || ||||| ||||| Sbjct 826 CCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGGGGAATGCCTTCT 885 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| || || ||| ||| ||| ||| || || || || | ||| || || || ||| Sbjct 886 TTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTG 945 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || ||||| |||| ||||| | ||| | ||||||| Sbjct 946 ATAGTTTTGCCAGTCAGCGTTTTCACGAAAATTTGCATT 984 Score = 140 bits (154), Expect = 8e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | ||| ||||| ||||| | ||| ||||| | || ||| | |||||||||| ||| Sbjct 1236 GTGCAAAGTAGATTCCTTTTGAATATTATAATCAGACAGAGTGCGTCCATCTTCTAACTG 1295 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 || || ||||| || || | |||||||| || ||||| ||||||||||| || || || Sbjct 1296 TTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATTTT 1355 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 | ||| ||| ||| || || || || | |||||| || || ||||| || ||||| || Sbjct 1356 TGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTGCCTGT 1415 Query 225690 CAAAGTTTTTATGAACACTTGCATT 225714 || ||||||| || | ||||||| Sbjct 1416 CAGTGTTTTTACAAAAATTTGCATT 1440 Score = 140 bits (154), Expect = 8e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | ||| ||||| || || | ||| ||||| | || || | |||||||||||||| Sbjct 1920 GTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCATCTTCTAGCTG 1979 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||||| || || ||||| | ||||||||||| ||||| ||||| |||||||| || || Sbjct 1980 TTTCCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATCCCTTCTTTGTCTTGAATTTT 2039 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 | ||| ||| ||| || || || || | |||||| ||||| || || || ||||| || Sbjct 2040 TGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTAATTGTTTTGCCAGT 2099 Query 225690 CAAAGTTTTTATGAACACTTGCATT 225714 || || |||| || | ||||||| Sbjct 2100 CAGTGTCTTTACAAAAATTTGCATT 2124 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | ||| ||||||||||| | ||| || || | || || | |||||||| || || Sbjct 1464 GTGCAAAGTAGATTCTTTTTGTATATTATAGTCTGACAGTGTGCGTCCATCTTCAAGTTG 1523 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 || || || || ||||| | ||||||||| || ||||| ||||| || || || ||||| Sbjct 1524 TTTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTT 1583 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 | ||| ||| |||||| ||||| || | |||||| ||||| || || || ||||| || Sbjct 1584 TGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAAGTAATAGTTTTGCCAGT 1643 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | || | |||||| Sbjct 1644 CAGTGTTTTAACAAAAATTTGCAT 1667 Score = 93.3 bits (102), Expect = 1e-13 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | ||| ||||| || || | ||| ||||| | || || | |||||||||||||| Sbjct 2376 GTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGTGTACGACCATCTTCTAGCTG 2435 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTG 225623 || || || || ||||| | ||||||||||| ||||||||||| |||||||| Sbjct 2436 TTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTGTCTTG 2489 >seq72952 Length=1956 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | |||||| ||||| || | |||||| || | | ||| | ||||| || ||||| Sbjct 359 GTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCCAGCTG 418 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| |||||||| || || |||||||| || || |||||||| || |||||||||||||| Sbjct 419 CTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTT 478 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||| ||| || |||||||||| |||||| ||||| ||||| || || || || Sbjct 479 GGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTTTTCCCTGT 538 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 | || |||| || | ||||| Sbjct 539 GAGTGTCTTTACAAAGATCTGCAT 562 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || ||||| || |||||||||||||| | |||||| || | | || | ||||| Sbjct 1034 CAGTACCAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCAGATAGGGTGCGACCATC 1093 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| | ||||| ||||| ||||| || |||||||| || || ||||| ||||| ||||| Sbjct 1094 TTCCAATTGCTTACCAGCAAAGATGAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTC 1153 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||| || || ||| ||| ||| || ||||| |||| ||| || ||||| || || || Sbjct 1154 TTGAATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTACTTCTAAAGTAATTGT 1213 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||||| | || | |||||| Sbjct 1214 TTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1246 Score = 132 bits (146), Expect = 1e-25 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || ||||| ||||| ||||| | ||| ||||| | | || Sbjct 1253 ACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGT 1312 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || || || ||||| || ||||| | |||||||| || |||||||| Sbjct 1313 ACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATACC 1372 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| ||||||||||||||| |||||| ||| || ||||| || | ||| || |||| Sbjct 1373 TTCTTTGTCTTGGATCTTTGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTACCTCTAG 1432 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || || || || | ||| || | || | |||||| Sbjct 1433 GGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 1475 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575 ||| ||||||||||||| ||||| || | | || | |||||||| | ||||| || Sbjct 1733 AGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTCCAATTGCTTGCC 1792 Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635 ||||| ||||| |||||||| || || ||||| ||||| ||||||||||| || ||| Sbjct 1793 CGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTT 1852 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| ||| || ||||| |||| ||| || ||||| || || || || || || | || Sbjct 1853 TACATTTTCAATTGTGTCAGAGGCTTCTACTTCTAAAGTAATTGTTTTTCCAGTAAGTGT 1912 Query 225696 TTTTATGAACACTTGCAT 225713 ||| | || | |||||| Sbjct 1913 TTTAACAAAAATTTGCAT 1930 Score = 120 bits (132), Expect = 7e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | | || | ||| ||||| ||||||||||| | |||||||| | | ||| Sbjct 1481 ACGAAGACGTAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGT 1540 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | ||||| ||||| |||||||| || || || || || || || || Sbjct 1541 GCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCC 1600 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 || ||||||||||| ||| || || ||| ||| || || || |||| |||||| |||| Sbjct 1601 CTCTTTGTCTTGGAT-TTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCTA 1659 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTT 225698 || || ||||| || || | ||||| Sbjct 1660 GAGTAATGGTCTTTCCAGTTAGGGTTTT 1687 >seq393 Length=4902 Score = 127 bits (140), Expect = 5e-24 Identities = 136/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| |||| || |||| |||| || ||||| ||| |||| ||||||||| | |||||| Sbjct 362 CAAATTTATAATACTATTGTTACAGCTCATGCTTTTATTATAATTTTCTTTATAGTTATG 421 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || || ||||||||||| ||||| |||||| | || || ||||| Sbjct 422 CCTATTATAATCGGTGGATTTGGAAATTGATTAGTTCCATTAATGCTAGGAGCCCCTGAC 481 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || ||||| || | | || |||||||| |||||| | || || || || ||| || || Sbjct 482 ATAGCTTTCCCCCGAATAAATAATATAAGATTTTGACTTCTTCCCCCCTCATTAATTTTA 541 Score = 109 bits (120), Expect = 1e-18 Identities = 87/105 (83%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||| ||||| ||||||||||| ||||||||||| || | ||||| || ||||| | Sbjct 938 ATACTTCTGGATGTCCAAAAAATCAAAATAAATGTTGGTATAAAATAGGGTCACCTCCTC 879 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 ||| ||||||||||| |||||| ||||||| ||||||||||| Sbjct 878 CTGCAGGATCAAAAAATGAAGTATTTAAATTTCGATCAGTTAAAA 834 >seq91159 Length=808 Score = 120 bits (132), Expect = 7e-22 Identities = 110/138 (80%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784 || || || || |||||| ||||| ||||| ||| ||||||||||||| |||||||||| Sbjct 159 ATGTCAAGAGTAGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCT 100 Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA 7844 | | | | |||||| || |||||||||| ||||||||||||||| | | |||||||| Sbjct 99 TGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCAACCTTGCGGTCGTACTCCCCAGGTGGA 40 Query 7845 AT-ATTTACGCGTTAGCT 7861 | || | ||||||||| Sbjct 39 TTGCTTAATGCGTTAGCT 22 >seq57945 Length=292 Score = 105 bits (116), Expect = 2e-17 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | ||| ||||| || || | ||| || || | || || | |||||||| || || Sbjct 158 GTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGACAGTGTGCGTCCATCTTCCAGTTG 99 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || ||||| || |||| |||||| ||||| ||||| |||||||||||||| ||||| Sbjct 98 CTTTCCGGCGAAAATTAGTCTTTGTTGATCGGGAGGAATGCCTTCCTTGTCTTGAATCTT 39 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCAC 225665 | ||| || ||||| || || || | |||||| Sbjct 38 TGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCAC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1188614395744818