Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq15400 232 5e-56 seq6456 118 9e-22 seq72952 105 5e-18 >seq15400 Length=3181 Score = 232 bits (256), Expect = 5e-56 Identities = 639/967 (66%), Gaps = 23/967 (2%) Strand=Plus/Minus Query 109140 CGCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTT 109199 ||| ||||| || ||||||||||| || | || || |||||||| | || | Sbjct 1358 CGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTAT 1299 Query 109200 GCCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAA 109259 || ||| | | |||||||| || || |||||||| || || ||||| |||||||| || Sbjct 1298 ACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAA 1239 Query 109260 CGACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCG 109319 ||| | | ||| || |||||||| | || ||||||| || || |||| || Sbjct 1238 TGACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCCG 1179 Query 109320 CGACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGG 109379 || || |||||||| || || ||||| ||||| || | |||||||| |||||||| Sbjct 1178 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 1119 Query 109380 CGTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATT 109439 || | | ||||||||||| ||||||||||||||||| ||||| ||| | ||| Sbjct 1118 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACA 1059 Query 109440 GGCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACG-TTGTCGGACCCGT 109498 || ||| | | || ||||| || || || || ||||||||| ||| || || | Sbjct 1058 AGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTTT 999 Query 109499 TTTATTTT--ATGCACGATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATT 109556 || |||| | || | | | || ||| | ||| || | || || || || Sbjct 998 CTTCTTTTTAGTTGACAAAT---CTAAGAGAACACGATTTGTGCAGTCAGTAAAGGAGTT 942 Query 109557 TTTACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAA 109616 | | | | ||||||||||| || || || || || |||||||||||||| || || || Sbjct 941 TCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGTAA 882 Query 109617 GGGTGCCAATCCGAGTCTCGGCGACGCA-ACGCGCGACAGCAAAACGTACATTGCGTTGT 109675 ||||| || || ||||| | || | | | | | ||| | ||| Sbjct 881 AGGTGCTAACCCTGACCTCGGTAGCCCAGAAGATGGTGATTGTTATGTAAGT----TTGA 826 Query 109676 TAAAAGAGTTGCGCGCCATGTTGGACGA-CTTGCAAACGGCCACCAA---CAAAACGTAC 109731 | ||||| || || | ||| | || || ||| || || | || ||| | ||| Sbjct 825 TGAAAGAATTACGTGAGATGCTCGATGAGCTTTCA----GCTAAGAATGGCAAGAAATAC 770 Query 109732 GAATTGACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTACGCGTCG 109791 || ||||| || |||||| | || | |||||||| | || || || |||| | Sbjct 769 GAGTTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAG 710 Query 109792 GCGCAACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTCA 109851 || ||| | ||| |||| | || || || |||| || || |||||||| || |||||| Sbjct 709 GCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAAGGAGCCTGGTCA 650 Query 109852 AACACGGACT-TAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACGAATT 109910 || ||| | || |||| || | |||||||||| | |||||||| || ||| Sbjct 649 AA-TGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGGAAAC 591 Query 109911 GTACACGACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaaaaaT 109970 ||||| | || | | || ||| | |||| ||| |||| ||||| || || Sbjct 590 TTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAATCCTAAGAAGAT 531 Query 109971 TATAATTGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCG-TCGTGCACGCCGACGACG 110029 | || | || || || ||||| || || || ||||| |||| || || | ||| ||| Sbjct 530 TGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATG-ATTACGAAGACA 472 Query 110030 CGAATCCGTTTTTGGGCATCGCCTCCGGTCCCGTGGAAGGCACTTGGGAAAACGGCGTGG 110089 | ||| || |||| ||| | || || || |||| |||||| || |||| |||| Sbjct 471 ACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAGTGG 412 Query 110090 TGGACTA 110096 | ||||| Sbjct 411 TTGACTA 405 >seq6456 Length=2491 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| || ||||| |||| |||||| || ||||| |||||||||||||| || | | Sbjct 985 CCACCTCTCAGTCTTAGTACCAAGTGCAAGGTAGATTCCTTTTGAATATTGTAGTCTGAC 1044 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | || |||||| | |||||| || ||| | |||||||| ||||||||| ||| Sbjct 1045 AGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCTGGGGGA 1104 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||| || || ||||||| ||| |||| | | || || | | | | Sbjct 1105 ATCCCTTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACT 1164 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || | |||||||| ||||| || | |||||| | ||||||||||||| Sbjct 1165 TCAAGAGTAATAGTCTTGCCGGTAAGTGTTTTCACAAAAATTTGCATT 1212 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 ||||| | ||||||||| ||||||||||| ||||| || || | || || |||| Sbjct 1456 AACACTAAGTGCAAAGTAGATTCTTTTTGTATATTATAGTCTGACAGTGTGCGTCCATCT 1515 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146 || | |||||| || ||| | ||||||||||||||||| || | ||||||||| || Sbjct 1516 TCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGAGGAATGCCTTCTTTATCC 1575 Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTT 101206 ||| ||| || |||| | | || || | | ||| | ||||||||| Sbjct 1576 TGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAAGTAATAGTT 1635 Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||||| |||| |||||||| |||||||||||| Sbjct 1636 TTGCCAGTCAGTGTTTTAACAAAAATTTGCAT 1667 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 || || | ||||||||| ||||| ||||||||||| ||||| | || ||| |||| Sbjct 1228 AAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCAGACAGAGTGCGTCCATCT 1287 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146 || || |||||||| || | || ||||| ||||||||| || | |||||| ||||| Sbjct 1288 TCTAACTGTTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTCC 1347 Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTT 101206 ||||||| || |||| | | || || | | ||| | || |||||| Sbjct 1348 TGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTT 1407 Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 ||||| |||| |||||| | ||||||||||||| Sbjct 1408 TTGCCTGTCAGTGTTTTTACAAAAATTTGCATT 1440 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 ||||||| ||||||||||||||| || |||||||| ||||| | || || |||| Sbjct 1912 AACACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCATCT 1971 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146 || | ||||| || ||| | |||||||| |||||||| || | ||||||||||| Sbjct 1972 TCTAGCTGTTTCCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATCCCTTCTTTGTCT 2031 Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTT 101206 ||||||| || |||| | | || || | | ||| | ||||| ||| Sbjct 2032 TGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTAATTGTT 2091 Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 ||||| |||| ||| || | ||||||||||||| Sbjct 2092 TTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 2124 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| || ||| | || | ||| | ||| |||||||| |||||||||||||| | Sbjct 757 CCACCTCTCAGTCTGAGAACAAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCAG-- 814 Query 101072 ATAGTTTTGG--AATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129 ||| | || | |||||| | ||| || || ||| | || | ||| ||||||||| || Sbjct 815 ATAATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGGG 874 Query 101130 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTG 101189 | | |||||||||||| ||||||| || |||| | | || || | | | Sbjct 875 GAATGCCTTCTTTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTA 934 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 ||| | || ||||||||||| |||| ||||| | |||||||||||| Sbjct 935 CTTCCAATGTGATAGTTTTGCCAGTCAGCGTTTTCACGAAAATTTGCATT 984 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/121 (77%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--AT 101084 ||||||| ||||||||||||||| || |||||||| ||||| | | ||| | || || Sbjct 2368 AACACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTG--ACAGTGTACGACCAT 2425 Query 101085 CTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGT 101144 |||| | ||||| || ||| | |||||||| |||||||| || | |||||||||| Sbjct 2426 CTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTGT 2485 Query 101145 C 101145 | Sbjct 2486 C 2486 >seq72952 Length=1956 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||||||| | | |||| ||| | || |||||||||||||||||||| || | Sbjct 1020 CCTCCTCGCAAACGCAGTACCAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCAG-- 1077 Query 101072 ATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129 |||| | || |||||||||||| || || ||| | || || | |||||| ||| | Sbjct 1078 ATAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATGAGACGTTGTTGATCTGGAG 1137 Query 101130 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTG 101189 | | |||||||||||| |||||| || |||| | | || || | || | Sbjct 1138 GAATGCCTTCTTTGTCTTGAATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTA 1197 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | ||||| ||||| || || | |||||||| |||||||||||| Sbjct 1198 CTTCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1246 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTTCCAATT 101093 |||||||| ||||||||||| || ||||| || | | ||| | || ||||||||||| Sbjct 1728 TGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG--AAAGTGTACGACCATCTTCCAATT 1785 Query 101094 GTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTT 101153 | |||||||| | ||||| | |||||| ||| || | |||||||||||| |||| Sbjct 1786 GCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTT 1845 Query 101154 TTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCG 101213 | || |||| | | || || | || | ||| | ||||| ||||| || | Sbjct 1846 TAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTACTTCTAAAGTAATTGTTTTTCCAG 1905 Query 101214 TCAATGTTTTAATAAAAATTTGCAT 101238 | | |||||||| |||||||||||| Sbjct 1906 TAAGTGTTTTAACAAAAATTTGCAT 1930 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || ||||||| | | |||| ||| | || || ||||| || ||||||||||| | | Sbjct 564 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAATCAGAC 623 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| |||||||||||| || || ||| | || || | ||||||||| ||| Sbjct 624 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGA 683 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT- 101190 | |||||| || || ||||| ||||||| | | || || | | ||| | Sbjct 684 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATG--GTTCTA 741 Query 101191 -TTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | |||||| || || || || |||||||| | ||| |||||||| Sbjct 742 CTTCCAGGGTAATGGTCTTTCCTGTTAATGTTTTCACAAATATTTGCAT 790 Score = 84.2 bits (92), Expect = 2e-11 Identities = 84/107 (79%), Gaps = 4/107 (4%) Strand=Plus/Plus Query 101041 AGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTT--TGGAATCTTCCAATTGTTTG 101098 ||| ||||| ||||||||||| ||||| | ||||| | | |||||||| |||||| Sbjct 1277 AGTAGATTCCTTTTGAATATTATAATCAG--ATAGTGTACGGCCATCTTCCAGTTGTTTT 1334 Query 101099 CCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 || ||| | |||||||| ||||||||| ||| | ||||||||||| Sbjct 1335 CCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTC 1381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408380925822873