Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq42954 556 2e-153 seq181590 93.3 6e-14 seq188143 89.7 7e-13 seq12094 84.2 3e-11 >seq42954 Length=2876 Score = 556 bits (616), Expect = 2e-153 Identities = 1096/1609 (68%), Gaps = 19/1609 (1%) Strand=Plus/Plus Query 76764 ATTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAG 76823 |||||| || || | ||||||||||| | | | ||| |||||||| |||| ||| Sbjct 522 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAG 581 Query 76824 TACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAA 76883 ||||| || ||||||| ||||| |||| ||| |||||| || || ||||| | Sbjct 582 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 641 Query 76884 TAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTA 76943 || |||| | || | ||| || || | || |||||||| || || || ||||||||| Sbjct 642 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCTCCTCTA 701 Query 76944 TCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGT 77003 ||||| ||||| | ||| || || | | ||| ||||| | |||||| | | | | Sbjct 702 TCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 761 Query 77004 TTGATATCATCTGGAAGGTTTGTATTTT---GAATGGAACCACCATCTGATATAATTGTA 77060 | || || | || | ||| | ||| | || || ||| | ||||||| | Sbjct 762 CTTATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGA 821 Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCT-GTTAAAACTCTAAGGAGATGAGGATT 77119 || || ||||| |||| ||| || | | ||| || ||| | | || |||||| | || Sbjct 822 TTTTTCATATCTTCATCCCATAAAT-CAGCTCGAGTCAAATCAGTCAGAAGATGATGGTT 880 Query 77120 AACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTC 77179 |||| ||||||||||||| || ||||| | ||||||||| ||| ||||||| Sbjct 881 CACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGTTC 940 Query 77180 CACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAA 77239 | ||||||| |||| || | |||||| |||||||| ||||| ||||||||||| | ||| Sbjct 941 AAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCAA 1000 Query 77240 TAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAG 77299 || | ||| | | ||||||| || || || ||||| || |||| |||||||| Sbjct 1001 TAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGTCCAGTCCCAAAG 1060 Query 77300 ATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCC 77359 |||| ||| | ||| | ||| || || || || || | ||||| ||| Sbjct 1061 GTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTTCC 1120 Query 77360 ATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCC 77419 | |||||| || | |||||| |||| |||| ||||||||| ||||| ||||| || Sbjct 1121 TTGATATGTGCTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACC 1180 Query 77420 GTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGG 77479 |||||||||||||| || || | | ||| || | ||||| ||| || | || Sbjct 1181 ATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAGG 1240 Query 77480 ATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538 || | | | | | ||| | |||||| | |||||||| |||||||| | ||| | | Sbjct 1241 -TATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGACAGGACGGT 1299 Query 77539 GTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTAT 77598 | ||| |||| ||| |||| ||||| || | ||||||| | |||| || || | ||| | Sbjct 1300 GCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGT 1359 Query 77599 TGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCAT 77658 | | ||| | || | ||| | || |||| ||| ||||| ||||| || Sbjct 1360 TTAAATTCTGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAAAATTAAATCGATTAT 1419 Query 77659 CTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGT 77718 | |||||||||||| | ||||| || || || || || ||||| || |||| | Sbjct 1420 TTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTG 1479 Query 77719 TGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTT 77778 | ||||| | | ||| || || ||||| |||||||| |||||||| ||||||| || Sbjct 1480 AAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTT 1539 Query 77779 GGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCT 77838 | || ||||| | ||||| | |||||||| | ||| | || || || || || | | Sbjct 1540 GATTACTCTTCCTGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGTCTCCACTT 1599 Query 77839 GTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGTATCGCCT 77896 | | ||| ||||| || ||||| | ||||| |||| | | | | ||| || | | Sbjct 1600 GAGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGAC--TCGTTTTATAAACCGT 1655 Query 77897 CTCTCTT--TCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAAT 77954 | |||| ||||||| | |||||| ||| ||||| ||||| || ||| | | Sbjct 1656 TTTTCTTCTTCATATTTGGCATATAGTGCTTCGAATTCCTCTCCGTAACAGTCAGCGAGG 1715 Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 ||||| || |||| || ||||| | ||| || |||| | | || | ||||||| Sbjct 1716 CCAGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACCCTTTTCATA 1775 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || ||||| |||||||||| |||| ||| || |||| | ||| |||||| || ||| Sbjct 1776 AACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCT 1835 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 || |||||||| | ||| | ||||| | || || | |||||| || |||| || ||| Sbjct 1836 GTGTTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAAATT 1895 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || ||||| || || || ||||||| ||||||||| || || || || Sbjct 1896 GCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTGTAC 1955 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 |||||||||||||| | | ||| || || ||||| || |||| |||||| || Sbjct 1956 ACTCTCAACATTGGCACTAGACCATTTGAAACCCCATTAGTGCCAGCTATATAAGACCCC 2015 Query 78255 CTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 || | ||| | | ||| || ||||| || || || ||||| |||| | Sbjct 2016 TGGGCTCTAATGCAATGTGTATG--TAAACCTATGCCACCGGCAGATTTAGAAATTAATG 2073 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCAT 78361 | || |||| || |||||| | ||||| || ||||| || || |||| Sbjct 2074 CACATTGTTTTAAAGTATCGAAAATACCTTCAATACTATCGTCTTTCAT 2122 Score = 120 bits (132), Expect = 4e-22 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 78542 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601 |||||| ||||| |||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 2583 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 2642 Query 78602 TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652 | ||| ||||| || |||| ||| |||| | || ||| || |||| ||| Sbjct 2643 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 2693 >seq181590 Length=632 Score = 93.3 bits (102), Expect = 6e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 78753 ttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCA 78812 || || || || || |||| ||| |||| |||||||| ||||| | ||| ||||||||| Sbjct 603 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 544 Query 78813 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTT 78872 ||||| | ||| || ||| ||||| ||||| || |||| | |||| | ||| |||| Sbjct 543 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 484 Query 78873 GTGACCCCATTATATA 78888 || || ||| ||||| Sbjct 483 GTTACACCAGAATATA 468 >seq188143 Length=771 Score = 89.7 bits (98), Expect = 7e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || |||| ||||||||||| || |||||||| ||||| || |||||||| ||||| | | Sbjct 481 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTGTACATCTGC 540 Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAATC 48723 ||||| || ||||| |||||||| ||||| |||| Sbjct 541 CATATGTCTGGATATTGAATTGGGAATATAACGAATC 577 >seq12094 Length=2216 Score = 84.2 bits (92), Expect = 3e-11 Identities = 152/219 (69%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 ||||| ||| ||| | ||| || || || | |||||||| | || |||||||| Sbjct 428 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAAGCCTCGTTTTTTC 369 Query 48225 AGCCAAAATATTGCCGCGAAAGAT-CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 | ||||||||||| || |||| | || || || ||||| || || || |||||||| || Sbjct 368 AACCAAAATATTGAAGC-AAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAGC 310 Query 48284 GGTAAGTCTCTCTCCGTAACTGGC---TTCGTTGTGTATCCACCGTTGTGCCCAATCAGC 48340 | ||| | ||||| | |||| | | || |||||| || ||||| || || Sbjct 309 GATAATACGTTCTCCAAATGTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGC 250 Query 48341 CTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 48379 ||||||||| | ||| || | || || || ||||| || Sbjct 249 CTTCTTCTTAATACATGGTAGAGTCTCAATTGCATTGAA 211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692442846714080