Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6456 140 7e-28 seq72952 113 1e-19 >seq6456 Length=2491 Score = 140 bits (154), Expect = 7e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||||||| ||||| || |||||||| ||||| || || |||||||| | ||| ||| Sbjct 763 CTCAGTCTGAGAACAAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTT 822 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| || || ||||| || || | |||||| ||||| | | || ||| Sbjct 823 CGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGGGGAATGCCT 882 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || ||||||||| || ||| | |||| | || ||| |||||||| | Sbjct 883 TCTTTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAAT 942 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||||||||| || || || |||||||| | |||||| Sbjct 943 GTGATAGTTTTGCCAGTCAGCGTTTTCACGAAAATTTGCATT 984 Score = 127 bits (140), Expect = 5e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| || || | || | ||||| || ||||| || ||||| || | | || Sbjct 991 CTCAGTCTTAGTACCAAGTGCAAGGTAGATTCCTTTTGAATATTGTAGTCTGACAGTGTG 1050 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| || ||| || || || ||||||||||| ||||| | | || ||| Sbjct 1051 CGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCT 1110 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| |||||||||||| ||| ||| | || | | || ||| ||| ||||||||| Sbjct 1111 TCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCAAGA 1170 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111 |||||||| ||||| || || || ||||| || | |||||| |||| Sbjct 1171 GTAATAGTCTTGCCGGTAAGTGTTTTCACAAAAATTTGCATTCCACCC 1218 Score = 109 bits (120), Expect = 1e-18 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 |||||| || ||||| || || ||||| | | ||| | |||||||||| ||| || Sbjct 1242 AGTAGATTCCTTTTGAATATTATAATCAGACAGAGTGCGTCCATCTTCTAACTGTTTGCC 1301 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 |||||| || |||||||| ||||| | | || |||||||| || ||||||||| || Sbjct 1302 GGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATTTTTGCCTT 1361 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| | |||| | || ||| || ||||| | || ||||||||||| || || || Sbjct 1362 AACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTGCCTGTCAGTGT 1421 Query 152087 CTTCACGAAGACCTGCATTTTACCC 152111 || || || | |||||| |||| Sbjct 1422 TTTTACAAAAATTTGCATTCCACCC 1446 Score = 104 bits (114), Expect = 5e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || || || || || ||||| | | || | |||||||||| Sbjct 1917 CAAG-TGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCATCTTCTA 1975 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | |||||| || || ||||||||||| ||||| | | || ||||| || ||||||| Sbjct 1976 GCTGTTTCCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATCCCTTCTTTGTCTTGAA 2035 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 ||||| || ||| | |||| | || ||| || ||||| | ||||| ||||||| Sbjct 2036 TTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTAATTGTTTTGC 2095 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || || ||||| || || | |||||| Sbjct 2096 CAGTCAGTGTCTTTACAAAAATTTGCATT 2124 Score = 91.5 bits (100), Expect = 3e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 |||||| |||||||| || || || || | | || | |||||||| || ||| || Sbjct 1470 AGTAGATTCTTTTTGTATATTATAGTCTGACAGTGTGCGTCCATCTTCAAGTTGTTTTCC 1529 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 || || |||||||| || ||||| | | || ||||| || || ||||| ||| || Sbjct 1530 TGCAAAAATAAGCCTTTGTTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTTTGCCTT 1589 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| | || | |||| ||| || ||||| | ||||||||||||||| || || || Sbjct 1590 AACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAAGTAATAGTTTTGCCAGTCAGTGT 1649 Query 152087 CTTCACGAAGACCTGCAT 152104 || || || | ||||| Sbjct 1650 TTTAACAAAAATTTGCAT 1667 >seq72952 Length=1956 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||||||||| |||||||| |||||||||||||| || | |||||||| ||||||| Sbjct 807 AGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAAGTTCGCCCATCT 866 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| || | || || || | | || || || || ||| Sbjct 867 TCCAGCTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGGAATACCCTCTTTATCT 926 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || | || | | |||| || ||| || || ||||| || || Sbjct 927 TGAATCTTAGCCTTTACGTTTTCAATGGTGTCAGATGGCTCCACCTCTAGAGTTATGGTC 986 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| || || | ||||| Sbjct 987 TTTCCTGTAAGTGTCTTGACAAATATTTGCAT 1018 Score = 104 bits (114), Expect = 5e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| |||||||| || ||||| || || ||||| | || || | |||||||| || Sbjct 1271 ATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCCATCTTCCAGTTG 1330 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || || ||||||||||| ||||| | | || ||||| || ||||| || || Sbjct 1331 TTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGGATCTT 1390 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 | || || | || | |||| || ||||| || || || || ||||| || || Sbjct 1391 TGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTACCTCTAGGGTGATGGTTTTTCCTGT 1450 Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105 |||||||| || |||| ||||||| Sbjct 1451 AAGAGTCTTAACAAAGATCTGCATT 1475 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| |||||||| ||||||||||| | | ||| | |||||||| | Sbjct 1496 CAAG-TGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCA 1554 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || |||||||| | |||||| || | | ||| || || || ||||| | Sbjct 1555 ATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGA 1614 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| ||| | || | | || || || ||||| |||||||| || || | Sbjct 1615 TTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCTAGAGTAATGGTCTTTC 1674 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || || || | |||||| Sbjct 1675 CAGTTAGGGTTTTAACAAAAATCTGCAT 1702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150031137960837