Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq72952 131 1e-25 seq6456 131 1e-25 seq91968 98.7 8e-16 >seq72952 Length=1956 Score = 131 bits (144), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||| || || | || || |||||||| ||| | || ||||| Sbjct 1475 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACCCTAGAGGTAGAACCATC 1416 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || || ||| | || || ||| || ||||||||||| ||||| || || Sbjct 1415 TGACACTATTGAAAACGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACCA 1356 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTAT 111276 ||| |||||||||| ||| || |||||| |||||||| | | ||||| | |||||| Sbjct 1355 ACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTAT--CTGATTAT 1298 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||||| ||||| |||||||| ||||||||||| |||||||| || ||||| Sbjct 1297 AATATTCAAAAGGAATCTACTCTACATTTAGTATTGCGTCTTCGTGGTGG 1248 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| |||||||| ||||| | || || || |||||||| | ||| ||||||| Sbjct 1702 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTAGAAGTGGAACCCTCT 1643 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | |||||| ||||| |||||||| ||| | || ||||| Sbjct 1642 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 1583 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || | ||||| | ||| || || |||||||||||| | ||| | | ||||| || Sbjct 1582 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCTGATTACAAC 1523 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || |||||||||||||| || || || || || ||||| || ||||| Sbjct 1522 ATTCAAAAAGAATCTACTCTTCACTTGGTATTACGTCTTCGTGGTGG 1476 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| ||||| | || || ||||| ||||| | ||| ||| || Sbjct 1930 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACTTTAGAAGTAGAAGCCTCT 1871 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | ||||| ||||| |||||||||||| |||| |||||| Sbjct 1870 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 1811 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111277 ||| | ||||||| |||||||| |||||||||||| || | ||| | | || || | Sbjct 1810 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTT--CTGACTACA 1753 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 | || |||||||||||||| | |||||||| | ||| | | ||||| Sbjct 1752 ACATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGG 1704 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| ||||| | || || ||||| ||||| | ||| ||| || Sbjct 1246 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACTTTAGAAGTAGAAGCCTCT 1187 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | ||||| |||||| |||||||||||| |||| |||||| Sbjct 1186 GACACAATTGAAAATGTAAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 1127 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111277 ||| | || || | ||| || || |||||||||||| || | |||| | || || | Sbjct 1126 CAACGTCTCATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTAT--CTGACTACA 1069 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 |||| ||||||||||| || || || | || ||||| |||| || || Sbjct 1068 ATATTCAAAAAGAATCCACCCTTCACCTGGTACTGCGTTTGCGAGGAGG 1020 >seq6456 Length=2491 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| ||||| |||| |||||||| ||||| | ||| |||| | Sbjct 1667 ATGCAAATTTTTGTTAAAACACTGACTGGCAAAACTATTACTTTAGAAGTGGAAGCTTCT 1608 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | | | | || || ||| ||| || ||||||||| |||| || ||| Sbjct 1607 GACACAATCGAAAATGTTAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGACCAA 1548 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||||||||||| ||| || |||||| | |||||| || || | || |||||| Sbjct 1547 CAAAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTATAAT 1488 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||||||||||||||||| | || |||||||||||||| | ||||| Sbjct 1487 ATACAAAAAGAATCTACTTTGCACTTAGTGTTGCGTCTAAGGGGTGG 1441 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||||||||| ||||| |||| |||||||| || || ||||| |||| | Sbjct 1440 AATGCAAATTTTTGTAAAAACACTGACAGGCAAAACTATCACATTGGAAGTGGAAGCTTC 1381 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | | | | || || ||||||| ||||| |||||| |||| || || Sbjct 1380 TGATACAATAGAAAATGTTAAGGCAAAAATTCAGGACAAGGAAGGCATTCCTCCAGACCA 1321 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| ||||| |||| || |||||||| || |||||| ||| || | |||||||| Sbjct 1320 ACAGAGGCTGATTTTCGCCGGCAAACAGTTAGAAGATGGACGCACTCTGTCTGATTATAA 1261 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||| ||||| |||||||| | || ||||| |||||||| | ||||| Sbjct 1260 TATTCAAAAGGAATCTACTTTGCACTTAGTTTTGCGTCTAAGGGGTGG 1213 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||||||||| || || |||| |||||||| ||||| | ||| |||| | Sbjct 2124 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACAATTACATTAGAAGTGGAAGCTTC 2065 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | | | | || || ||||||| ||||||||||| |||| ||| || Sbjct 2064 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGGATTCCTCCCGACCA 2005 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| |||||||||| ||| || ||||| | |||||| | || || | |||||||| Sbjct 2004 ACAGAGGCTTATTTTTGCAGGGAAACAGCTAGAAGATGGTCGTACGCTGTCAGATTATAA 1945 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||| || || ||||| || | || || ||||||||||| | ||||| Sbjct 1944 TATTCAGAAGGAATCAACTTTGCACTTGGTGTTGCGTCTTAGGGGTGG 1897 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||||||||| || || |||| ||||| || || || ||||| |||| | Sbjct 1896 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTGGAAGCTTC 1837 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || || ||||||| || ||||| ||| ||||| ||||| Sbjct 1836 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 1777 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||||| ||||||| ||| || || || | |||||| || || | || || || Sbjct 1776 GCAAAGACTTATTTTTGCTGGAAAGCAGCTCGAAGATGGACGTACACTGTCAGACTACAA 1717 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||| || || |||||||| |||||||||| |||||||| | ||||| Sbjct 1716 TATTCAGAAGGAATCTACCTTACATTTAGTTCTGCGTCTGAGAGGTGG 1669 Score = 100 bits (110), Expect = 2e-16 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||||||||| || |||||| |||| |||||||| || || ||||| ||| | Sbjct 984 AATGCAAATTTTCGTGAAAACGCTGACTGGCAAAACTATCACATTGGAAGTAGAAGCTTC 925 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | | | | || || ||||||| |||||||||||| ||||| || || Sbjct 924 TGATACAATAGAAAATGTTAAGGCAAAAATTCAGGACAAAGAAGGCATTCCCCCAGACCA 865 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTAT 111276 ||| ||| | |||| ||| || || ||| | |||||| | || | ||| | ||||| Sbjct 864 ACAGAGGTTGATTTTTGCCGGTAAGCAACTTGAAGATGGACGAACATTAT--CTGATTAC 807 Query 111277 AATATACAAAAAGAATCTACACTACA 111302 ||||| || ||||||||||| || || Sbjct 806 AATATTCAGAAAGAATCTACTCTCCA 781 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||||||||| ||||| | |||||||| || ||||| | ||| || || Sbjct 1212 AATGCAAATTTTTGTGAAAACACTTACCGGCAAGACTATTACTCTTGAAGTTGAGCCTTC 1153 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || ||| ||||||| || || ||||| ||||| || || Sbjct 1152 TGATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGGATTCCCCCAGACCA 1093 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| |||||||||| ||| || |||||| | |||||| || || | || || || Sbjct 1092 ACAGAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAA 1033 Query 111279 TATACAAAAAGAATCTAC 111296 ||| ||||| |||||||| Sbjct 1032 TATTCAAAAGGAATCTAC 1015 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/200 (70%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||||||||| || || |||| ||||| || || || ||||| |||| | Sbjct 2352 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTGGAAGCTTC 2293 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || || ||||||| || ||||| ||| ||||| ||||| Sbjct 2292 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 2233 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 111276 ||||| ||||||| ||| || || || | |||||| | | ||||| | || || Sbjct 2232 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACACTAT--CTGACTAC 2175 Query 111277 AATATACAAAAAGAATCTAC 111296 ||||| || || |||||||| Sbjct 2174 AATATTCAGAAGGAATCTAC 2155 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252 ||||||||||| |||| ||| ||||| |||||||||| ||| || ||||| | ||| Sbjct 2486 GACAAAGAAGGTATTCCTCCCGACCAACAGAGGCTTATTTTTGCAGGAAAACAGCTAGAA 2427 Query 111253 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 ||| | || || | ||||||||||| || || ||||| || | || || |||||| Sbjct 2426 GATGGTCGTACACTGTCAGATTATAATATTCAGAAGGAATCAACTTTGCACTTGGTGTTG 2367 Query 111313 CGTCTGCGCGGTGG 111326 || || | ||||| Sbjct 2366 CGCCTTAGGGGTGG 2353 >seq91968 Length=4039 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 104735 AACGGGTTCTACTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTCTGCAAAGTGGAA 104794 ||||| ||||| || |||| |||| || ||||| ||||||||||| || ||||| ||| Sbjct 933 AACGGCTTCTATTACCTGGGCCGCGGTGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 874 Query 104795 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCCGTAGATCATAAACGATGGGCGCCACAG 104854 || ||| ||| | | ||||||||| || ||| || || |||| |||||||| ||| Sbjct 873 ATTATGAAATGGGTCGCGGGCGACGATCCCGCCAAGGACCACCAACGGTGGGCGCCCCAG 814 Query 104855 TGCCCGTTTTTGCG 104868 ||||| || |||| Sbjct 813 TGCCCCTTCCTGCG 800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420493365190072