Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq72952 161 2e-34 seq57945 105 1e-17 seq148147 104 5e-17 seq49370 87.8 4e-12 seq3672 86.0 1e-11 >seq72952 Length=1956 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | ||| | ||||| || ||| ||||| || || || |||| Sbjct 1247 ACCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGA 1306 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || |||||||| || |||||||| || ||||| || | | |||||||| || Sbjct 1307 TAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGG 1366 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| || ||||||||||||||||| || ||| | || |||||||| || | ||| || Sbjct 1367 AATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTAC 1426 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || ||||| || || || || | ||||||||| || ||||||||| Sbjct 1427 CTCTAGGGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 1475 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || | ||||| || | || ||||||||| |||||||| |||| | Sbjct 1476 CCACCACGAAGACGTAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 1535 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || | ||| || || |||||||| | ||| || || ||| || Sbjct 1536 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 1595 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||| ||||||||||| || |||||||| | || ||||| || || | ||| ||| Sbjct 1596 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 1655 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || ||||| || || | || ||||| || |||||||| Sbjct 1656 TCTAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1702 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || ||||| ||||| | || || ||||||||||||||||| | Sbjct 791 ACCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGA 850 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || ||||| || || || || ||||||||||| | ||||||||| || || Sbjct 851 TAAAGTTCGCCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGG 910 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||| || ||||| ||||| || |||||| | || || ||||| || | || || Sbjct 911 AATACCCTCTTTATCTTGAATCTTAGCCTTTACGTTTTCAATGGTGTCAGATGGCTCCAC 970 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || ||||| || || | ||||| || ||||| ||||| Sbjct 971 CTCTAGAGTTATGGTCTTTCCTGTAAGTGTCTTGACAAATATTTGCAT 1018 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | | |||||||| | ||| || || ||||||||||||||||||||||| Sbjct 1703 ACCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 1762 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || ||||| || | ||| || || || || || | ||||||||| || || Sbjct 1763 AAGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGG 1822 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || ||||||||||| || || ||||| | || || ||||| || ||||| || Sbjct 1823 AATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTAC 1882 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| || || || || || | || ||||| || || ||||| Sbjct 1883 TTCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1930 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || || | ||||| || || ||| ||||| || || |||||||||| || || || Sbjct 345 AGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGA 404 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 |||||||| || || || || || || || | ||||||||| || ||||||||||| Sbjct 405 CCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCT 464 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 |||||||||||||| ||||| || | || |||||||| || | ||| ||||| | ||| Sbjct 465 TTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCACTTCTAATGTG 524 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || || | ||||| || || |||||||| Sbjct 525 ATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 562 >seq57945 Length=292 Score = 105 bits (116), Expect = 1e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || || || || ||||| | || ||||| ||||| || ||||| || ||||| || Sbjct 146 TTCCTTCTGAATATTATAGTCTGACAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAA 87 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | | |||||| || ||||| || ||||||||||| |||||||| |||||| | Sbjct 86 AATTAGTCTTTGTTGATCGGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTT 27 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTT 283053 ||||| || || |||||||| |||| Sbjct 26 CTCGATTGTATCAGAAGCTTCCACTT 1 >seq148147 Length=616 Score = 104 bits (114), Expect = 5e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || ||||||||||| || || |||||||| | || |||||||| |||| ||| | Sbjct 616 GAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAA 557 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATAT 283107 |||| | ||| || || |||||||| | || || ||||| ||||||||||| |||| Sbjct 556 CTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTTACGAAAATCTGCATTTTGATAT 500 >seq49370 Length=3801 Score = 87.8 bits (96), Expect = 4e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| Sbjct 2642 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGTGGGAGACCGGGGTTCAATTCCCCGA 2699 >seq3672 Length=3751 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 418 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1043301241686938