Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq15400 181 8e-41 seq72952 125 5e-24 seq6456 86.0 4e-12 >seq15400 Length=3181 Score = 181 bits (200), Expect = 8e-41 Identities = 778/1214 (64%), Gaps = 53/1214 (4%) Strand=Plus/Plus Query 5735 TGTTACCTA-ACCCTTGATTCATGGAGTTTAACAAGTCGCCGTTGTCCGCGTCGATTTCC 5793 ||||||| | |||| || ||||||| || | | || |||||||| |||||||||||| Sbjct 166 TGTTACCGAGACCCATG-TTCATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCC 224 Query 5794 CATCCAAATAGACCCCCCAGCCCCTTTTGGATGACATATTTTCCCTTGGCCGTCACGGAC 5853 || |||| ||||| || || || | | |||||||| ||||| | | || || Sbjct 225 CAAGCAAAGAGACCACCTAGTTTGTTATTTCTCACATATTTACCCTTTTCAATAACTGAT 284 Query 5854 CTCTCGTCGTCGTAGGTGACGAGATCGTC-GTTG-TGGT----ACACGTAGGGCGCTTGC 5907 || | | ||| ||||| || || || | |||| |||| | || || || ||||| Sbjct 285 CTAGCATTGTCATAGGTTACAAGGTCTCCAGTTGATGGTCTGAAGACATAAGGAGCTTGG 344 Query 5908 GCCACTCCGTCGTAAT-----------TCGGGTTGGG--ATACCGGTTCGTGATGTCTTT 5954 || || |||||||| | | ||| | || | |||| || || | Sbjct 345 GCGACATTGTCGTAATGAAATTCCCACTTGCCTTGAGCAATTTCA-TTCGCAATCTCCCT 403 Query 5955 GTAGTCCACGACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGCAGTGCCTGTGAA 6014 |||||| || || |||| || ||| | ||| || || || || || || |||||||||| Sbjct 404 GTAGTCAACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAA 463 Query 6015 GGGATTGTTGT--TGGTGATGTTGTGGATTCCACGCCATCCCCTGCCGTACATGGCCACG 6072 |||| |||||| | || || || | ||| ||| || | || |||||||| || Sbjct 464 GGGAATGTTGTCTTCGTAATCATGA--ACGCCAGTCCAACCACGACCATACATGGCAACA 521 Query 6073 CCCACCACCAATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGGACGGCGAACGCG 6132 || | || | || || || ||||| | ||| | || | || || |||| | Sbjct 522 CCTAATACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCA 581 Query 6133 GTGGTGTACTTTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTCTGCAGTCCCAGA 6192 | ||||| |||| |||| ||||||| |||||||||| || || || |||| ||| Sbjct 582 GATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGA 641 Query 6193 TCGGTGTTAGACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATATGATCCAGATAC 6252 || ||||||||||| ||||| || || |||| | |||||||||||||| ||| Sbjct 642 GTATCATTTGACCAGGCTCCTTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAA 701 Query 6253 TCCTGCACCGCACCGTATTCTACAACGTTTATTTTGTCGTAGCCCCCGCTGATGGCGCTT 6312 | || || ||||| || ||||| | ||||| || | || ||| || || Sbjct 702 TTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAA 761 Query 6313 GTGAGCAGATA---CTTGCGACCCGTGCGAGTCTCCAGACCGTCCAGCATGGACCTGAGG 6369 || | | || ||||| | | | || || | || ||||| | | Sbjct 762 GTCAACTCGTATTTCTTGCCATTCTT---AGCTGAAAGCTCATCGAGCATCTCACGTAAT 818 Query 6370 TCGCCCAAGAGCGCTTGATAGGTGACGCCGTCGACTGTGACGTTTCCTAAGGCAGGATTG 6429 || || | | ||| | || || ||| | | || | | |||| || Sbjct 819 TCTTTCATCAAACTTACATAACAATCACCATCTTCTG---GGCTACCGAGGTCAGGGTTA 875 Query 6430 GCTCCCTTGCCTCCGGGAAATTCCCAATCTATGTCCACGCCGTCGAAGAACTTCCAAGTT 6489 || || || || || ||||| |||||||| || || || || |||||||| ||||| ||| Sbjct 876 GCACCTTTACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTT 935 Query 6490 TCCAGAAATTCTTCGACGCTCTCTACGAACACCTTTCTTTTAATCGTGTCGTTGAGCTGG 6549 ||||| || | || || || || |||| ||| |||| | | Sbjct 936 AGGAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAG 995 Query 6550 TAAAAGGGATCGCTCAGCGTCCACCCACCGATCGAGGGCAGGATGGTCAGAT----GCGG 6605 | || |||||| |||||||||||||| |||||||| || || ||| | |||| Sbjct 996 AAGAAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGG 1055 Query 6606 ATTGTGTTTTCGTATGGCCATAAGCTGACCGAAATTACCCTTGTA----CATTTCCGAGT 6661 | |||||| || | ||| | || || || || || ||||| |||| | Sbjct 1056 GCT-TGTTTTAGT---GACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGA 1111 Query 6662 AGGCCTCGACGCCCTTCTGGGGTTTTTGTAGTGCGCCCCATATATCGTGTATGGACACCT 6721 || | | || || || |||||||||| ||| ||||| |||||| || || || | Sbjct 1112 AGAC----AATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTT 1167 Query 6722 TGAAGTCGTCTCGTCCCTCGCACGATCGCTGCAGAGCTTCGAACGAGCCCGGCACCTGTT 6781 ||||||| || || || || || || ||||| |||| ||| ||| | || || Sbjct 1168 TGAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTT 1227 Query 6782 TCAGAGC-GTCGTTGATACCATCCCCTCCGCACATGGGCACGAATCCGTACAGCAGATGT 6840 | | ||| ||| || || || || || ||||| ||||| | || || || |||| ||| Sbjct 1228 TTA-AGCTGTCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGA 1286 Query 6841 GTGAGATTGGGAATGGGGATTCTGTCGGCGGGAAACTGTCTGTCGTAAACACCCCACTCC 6900 || ||||| || || || || | || |||| || | || || |||||||| || Sbjct 1287 GTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCT 1346 Query 6901 ACGAAGTAAGCTCC 6914 |||||||| || || Sbjct 1347 ACGAAGTAGGCGCC 1360 >seq72952 Length=1956 Score = 125 bits (138), Expect = 5e-24 Identities = 173/239 (72%), Gaps = 5/239 (2%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || |||| ||| | | || || ||||| || ||||||||||||||| Sbjct 782 TATTTGCATACCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTT 841 Query 44161 GTAATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGC 44218 ||| || | |||| ||| | || ||||||||||| ||||||||||| | ||| || Sbjct 842 GTAGTCCGATAAAGTT--CGCCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGTTGT 899 Query 44219 TGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCG 44278 ||||||| ||| | ||| || || || ||||| ||| | || | |||||||| Sbjct 900 TGATCTGGAGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACGTTTTCAATGGTGTCA 959 Query 44279 GCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | | |||||||| | || || |||||||| || || ||||| || || |||||||| Sbjct 960 GATGGCTCCACCTCTAGAGTTATGGTCTTTCCTGTAAGTGTCTTGACAAATATTTGCAT 1018 Score = 95.1 bits (104), Expect = 9e-15 Identities = 164/237 (69%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || |||| || | || ||||||||||| ||| || ||||| || || Sbjct 1010 TATTTGCATACCTCCTCGCAAACGCAGTACCAGGTGAAGGGTGGATTCTTTTTGAATATT 1069 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || | || ||| | || |||| ||||| || |||||||| | ||| || || Sbjct 1070 GTAGTCAGATAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATGAGACGTTGTTG 1129 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 ||||| ||| | ||||| || || || || ||| | || | || ||||| | Sbjct 1130 ATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTAGCCTTTACATTTTCAATTGTGTCAGA 1189 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||| || || | ||||| || ||||| || || || || || || |||||||| Sbjct 1190 GGCTTCTACTTCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1246 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | || |||| ||| | ||| ||| || || || ||||| || Sbjct 332 CATACCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTC 391 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| || | || ||||||||||| || || || || | ||| || ||||||| Sbjct 392 AGAGAGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGG 451 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGATT 44285 || | ||| || || || ||||| |||| || || | || ||||| | || || Sbjct 452 GGGAATACCCTCTTTGTCTTGGATCTT-GGCTTTAACATTTTCAATAGTGTCTGAGGGTT 510 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || | || || || || || ||||| ||||| || ||||| ||||| Sbjct 511 CCACTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 562 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | || |||| |||||| || || ||||| ||||||||||| Sbjct 1472 CATTCCACCACGAAGACGTAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATC 1531 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || |||| ||||| || |||||||| | |||||||||||| | Sbjct 1532 AGAAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGG 1591 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || || || || || || || | || | || || || | || ||| Sbjct 1592 TGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTC 1651 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || | ||||| |||||||| || ||||| || || || || ||||| Sbjct 1652 CACTTCTAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1702 >seq6456 Length=2491 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||||||| | || ||||| || || || || || || |||||||| | Sbjct 757 CCACCTCTCAGTCTGAGAACAAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCAGAT 816 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 | | || | || || || ||||| |||||||| ||||| | ||| || |||| || Sbjct 817 AATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGGGGA 876 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||||| || ||| || || ||| | || |||| || || | | ||| || Sbjct 877 ATGCCTTCTTTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACT 936 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || || || || || || || |||||||| |||||||| Sbjct 937 TCCAATGTGATAGTTTTGCCAGTCAGCGTTTTCACGAAAATTTGCAT 983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358865707530099