Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq434 187 2e-42 seq12 105 6e-18 >seq434 Length=190249 Score = 187 bits (206), Expect = 2e-42 Identities = 577/886 (65%), Gaps = 15/886 (2%) Strand=Plus/Plus Query 105613 ACGCCGGTCCAGCCGCGGCCGTACATGGCGACGCCCACAATTATTTTGTTGGGATCGACG 105672 || || ||||| || ||||||||||| || || || || | || || || ||| ||| Sbjct 113945 ACTCCAGTCCAACCACGGCCGTACATAGCAACACCAACGACGATCTTCTTAGGACTGACT 114004 Query 105673 CCTTGTTTCAGTAACGCATCGACAGCGTAGTGTGTAGTGTATAGCTCTTCCGAGTTCCAA 105732 || || || | | |||| || ||| || ||||| ||| | | |||||| Sbjct 114005 CCCTGAGCCAACAGGAATTTGACACCGAAGTCAGTTGTGTAAGTCTCCTTGGGGTTCCAT 114064 Query 105733 CTTGGCGCGTAGACTGTTGTTTGGTAGCCCAAATCCGTGTTTGACCAAGCCCCTTTAAAA 105792 || |||| | | | ||||| ||| | | |||||||||||| || || || Sbjct 114065 GCGGGAGCGTGCAGAGCAGCTTGGTGGCCAAGAGTGTCGTTTGACCAAGCTCCCTTGAAG 114124 Query 105793 TCGTAACTCATGAGAAATATTTTGCCTAATGACTTTTGCGCTTCGGCGTAGTTTACCACG 105852 || || ||||| | || || | | | ||| ||| || | ||||| |||||| Sbjct 114125 TCATAGCTCATCAAGAAGATGTGATCCATGTACTGTTGAGCCGCCTTGTAGTCTACCACC 114184 Query 105853 GCAATCTTGTCGTAACCCGCGCTTATAGCGCTTGTTAATTCGTAAACCCTGCCGGTTTGC 105912 ||||||||| |||| | ||| || || || | |||||| | |||| || | Sbjct 114185 TGAATCTTGTCCCAACCAGAGCTGATGGCTGAAGTCAGTTCGTATTTCTTGCCTGTCTTG 114244 Query 105913 GCTTCGAGGTCGTCTAGCATTGCGCGCAGCTCCTCCAACAACAAAATGTATGTTTTGGCG 105972 || || |||| ||||| | | ||| |||| || || | | ||| | | Sbjct 114245 GCAGACAGCTCGTTGAGCATCTCTCTCAGTTCCTTCATCAGCTCGACGTAGAT------G 114298 Query 105973 TCACCGTCCGCATCGC--CCAACGAC-GGGTTAGCCCCTTTGCCGCCCGGAAACTCCCAA 106029 | |||||| || || || | | |||||||| || || || || || |||||||| Sbjct 114299 TGACCGTCGTCAGGGCTACCGAGATCAGGGTTAGCGCCCTTACCACCAGGGAACTCCCAG 114358 Query 106030 TCGATGTCTACACCGTCAAAGAATTTCCACACTTGCAGAAATTCCTTAACCGAATCTACA 106089 |||||||| || ||||| ||||||||||| || || || |||||||| || || || Sbjct 114359 TCGATGTCCACTCCGTCGAAGAATTTCCAGGTTTCAAGGAAGTCCTTAACAGAGTCGAC- 114417 Query 106090 AAAACGTTTCTTTTTTCAACATCGT--GCATAAAATAA-AATGGGTCTGATAGAGTCCAG 106146 || || ||| | || ||| | || | | || || ||||| || | | |||||| Sbjct 114418 GAAGCGCTTCCTCTT--AACCTTGTCAGTGAAGAAGAAGAATGGATCAGCCAAGGTCCAG 114475 Query 106147 CCTCCTATTGAAGGAAGAATTTTTAAATGGGGGTTTGCTAATTTTGCCGCCATCAACTGT 106206 || || | ||||| | || || | | || |||| ||| | ||||| ||| Sbjct 114476 CCACCAACGGAAGGTAAGATCTTCAGGTCAGGTCTTGCCTGTTTCAACATCATCAGCTGG 114535 Query 106207 CCAAAATTGCCTTTATACGGCTCGTTCCAAGCGGACACACCTTTTTGGGGTTTTTGTACG 106266 || || || || || || || || ||||| | | || ||| ||||| ||||| || | Sbjct 114536 CCGAAGTTACCCTTGTAGGGTTCATTCCAGGACGCCAAACCCTTTTGTGGTTTCTGAAGA 114595 Query 106267 GCGGCCCACGGATCGTGAATGGCAACTTTGAAATCTTCGCGTCCCTTGCACGATCTTTGC 106326 || ||||| || ||||| || | |||||||| ||||| | || |||| |||| |||| Sbjct 114596 GCTGCCCAAGGGTCGTGGATCGATACTTTGAAGTCTTCCCTGCCGCTGCAGGATCGTTGC 114655 Query 106327 AAAGATTCAAAGCTTCCGGGTATCGTTTTGAGGGCGTCGTTTATTCCATCGCCGCCGCAG 106386 | || || || || || || ||| | |||||| || ||||| || |||||| Sbjct 114656 AGAGCTTGGAAACTGCCTTCGATTTCTTTCAAACTGTCGTTGATGCCATCTCCACCGCAG 114715 Query 106387 ATGGGTATGAAACCATACAACAAGTGTGATAAATTTGGCAAGGGAACTTTGTCTACGGGA 106446 || || |||||||| |||| | || | | ||| || | ||| || ||| ||||| Sbjct 114716 ATTGGGATGAAACCGTACAGAAGATGGGTAAGATTCGGGATGGGTACGCGGTCGACGGGG 114775 Query 106447 AAGTTGCGCCCGTACACACCCCACTCAACAAAGTACGCAGCGACAA 106492 || || | ||| || ||||| || || ||||| || | |||| Sbjct 114776 AACTTCCTGGGGTAGACGCCCCATTCGACGAAGTAAGCGCCAACAA 114821 >seq12 Length=2918994 Score = 105 bits (116), Expect = 6e-18 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| ||||||| ||||| ||||| || || ||| ||| |||||| | Sbjct 2850427 ATGCAAATCTTCGTCAAAACCTTGACCGGCAAGACTATCACCCTAGAAGTTGAACCCTCC 2850368 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || |||| ||||| || || |||||| | || |||||| Sbjct 2850367 GACACTATTGAAAATGTTAAAGCCAAAATCCAGGACAAGGAAGGTATTCCACCAGATCAG 2850308 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 || || | ||||| || |||||||| |||||||| || | ||| | ||||||||| Sbjct 2850307 CAGCGATTGATCTTCGCCGGCAAACAGCTGGAAGACGGTCGCACACTTT--CCGATTACA 2850250 Query 29140 ATATTCAGAAGGAATCTACTCTTCAC 29165 ||||||| |||||||| ||||| ||| Sbjct 2850249 ATATTCAAAAGGAATCCACTCTACAC 2850224 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| ||||||| ||||| ||||| || || || ||| || ||| | Sbjct 2852465 ATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACTATCACACTAGAAGTTGAGCCCTCT 2852406 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || |||||| || || |||||| | || ||| || Sbjct 2852405 GACACAATTGAAAATGTCAAAGCTAAAATTCAGGACAAGGAAGGTATTCCTCCAGACCAG 2852346 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | ||||| || ||||| ||| |||||||| ||| || | ||||||||| Sbjct 2852345 CAGCGATTGATCTTCGCCGGCAAGCAATTGGAAGATGGGCGAACCTTGTCTGATTACAAT 2852286 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||||||||||| ||||||||| |||| | || |||| || || Sbjct 2852285 ATTCAGAAGGAATCCACTCTTCACTTGGTACTTCGTCTACGTGGTGG 2852239 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || ||||| || || | || || |||||||| |||||||| || || ||||||| Sbjct 2853152 AACATGCAGATCTTTGTGAAGACTTTGACGGGGAAAACCATAACATTAGAGGTGGAACCC 2853093 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | |||| ||||||| ||||| ||||| | || ||| Sbjct 2853092 TCTGATACCATTGAAAACGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCTCCCGAT 2853033 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 ||||| ||| | ||||| || || |||||| |||||||| ||| | |||| ||| Sbjct 2853032 CAACAGAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGCACTCTTTCCGACTAC 2852973 Query 29139 AATATTCAGAAGGAATCTACTCTTCA 29164 ||||| |||||||| ||||||||||| Sbjct 2852972 AATATCCAGAAGGAGTCTACTCTTCA 2852947 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | || || ||||| || |||||||| ||| ||| || || | Sbjct 2424658 ATGCAGATTTTCGTAAAGACCTTGACTGGAAAAACCATCACCCTAGAAGTTGAGCCTTCT 2424717 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | ||||| || || || || ||||| | ||| ||| || Sbjct 2424718 GATACCATCGAAAACGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 2424777 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | ||||||||||| ||||| || || |||||| ||| | | ||||||||| Sbjct 2424778 CAGCGTCTTATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTTTCTGATTACAAT 2424837 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||| |||||||| |||||| |||| || || | ||||| || Sbjct 2424838 ATCCAGAAAGAATCTACCCTTCACTTGGTCTTGCGTCTGCGAGGTGG 2424884 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | ||||| || || || ||||||||||| ||| |||||| | Sbjct 2849971 ATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACATTAGAAGTTGAACCCTCT 2849912 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | || |||||| ||||| || || | || ||||||| Sbjct 2849911 GACACAATTGAAAACGTGAAAGCCAAAATTCAAGATAAGGAGGGAATTCCACCAGATCAA 2849852 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | || || || ||||| || || ||||| ||| | ||||||||||| Sbjct 2849851 CAAAGATTGATTTTCGCTGGCAAGCAGCTTGAAGACGGGCGCACTCTTTCCGATTACAAT 2849792 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 ||||| |||||||| || ||||| Sbjct 2849791 ATTCAAAAGGAATCAACACTTCA 2849769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428330795316035