Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq33 569 3e-157 seq416 104 3e-17 >seq33 Length=1899332 Score = 569 bits (630), Expect = 3e-157 Identities = 1200/1763 (68%), Gaps = 54/1763 (3%) Strand=Plus/Minus Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919 || || ||||| |||| |||||||||||||||||||| || | |||| | || ||| Sbjct 686913 GCTGGCTTCGTGCGTAAATAGTACATTCCCGTTTTTAAGCCCATTTTCCACGCATAGAAA 686854 Query 64920 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 64979 || ||| || | ||| |||| | || || || | ||| ||||| | ||||| || Sbjct 686853 TGAATAGATGTCAATTTACCATAATTTGGTTCAGCAACATGAATATTGAAGGATTGGCTC 686794 Query 64980 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 65039 ||||| || || || || ||||| |||||||||| ||| | || ||| | | |||| Sbjct 686793 TGATCAATAAATGCCCCTCTGTCAGCAGCCATTTGTATTGTTGTTTTTACAGACACTTCC 686734 Query 65040 CAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAG-GTTTG--TATTCTGAATGGA 65095 || | ||||||||| || || |||| |||||| |||| | || |||| ||||| || Sbjct 686733 CAGACAGTTTTATATAAGTCCCTTA-TATCTTTAGGAATTGCTTCAATATTTTGAATAGA 686675 Query 65096 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 65155 |||| || || || ||| || || || |||| |||||| | || ||||| Sbjct 686674 TCCATTATTGTGGATGATAAGATTTTTCATATCTTCATCCCATAAATCAGCTTCAGTTAA 686615 Query 65156 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTC---TCCGAGT 65212 | ||| | | ||| ||||||| ||||| ||||| || ||||| |||| || || Sbjct 686614 ATCTCGTAACAAATGATGATTAACAACTTGGAATTCACCTGACAAGACTCGTCTCTGA-- 686557 Query 65213 GTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGA 65272 ||||| || ||| | ||||| | || |||||||||||||| ||||||||||| || Sbjct 686556 -TAAATGTTGGAAGTAAATGGTTCAAATGATTCATTATTTCCCAATATTTGAGCAGTGGA 686498 Query 65273 TGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTA 65330 |||||| ||||| || || | |||| |||||||||||| ||||| | ||||| Sbjct 686497 TGCAGTTGGCATTGGAGCTAATAATAGGGAATTTCTAAGACC--ATGTTTGGCAATTTTT 686440 Query 65331 TCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGT 65390 ||||| || | |||||||||| | || | || ||| Sbjct 686439 TCTTTGAGTGACACCCAATTCCACAAGTCTGTGGGGGTTTTATTCCACATATCATATTGC 686380 Query 65391 AGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGC 65449 | ||||| | |||||| | || | ||| |||| || || || || | ||||||||| Sbjct 686379 AATATACCTTGACTGGCAGGAC-AGCCTTCATAAGTCTCATAGACGCCATACTTCTCAGC 686321 Query 65450 TAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAG 65509 || |||||||| || |||| ||| || |||||||| ||||| || || | | ||||| Sbjct 686320 TAACTCACAACTGGCTTCTAGTGCCCCATAATAAATTGTTTCAAATATTTGTTGATTTAA 686261 Query 65510 ATCTTGTGCTTCCAGGCTATC-AAATGGATA--ATTTAAGAGAATAAACGCGTCTGCTAA 65566 | |||| || || || || | ||| |||| || ||| || || ||||| Sbjct 686260 TTTAATTGCTGCCTCACTTTCGTAAGGTATACGCATTAA---AACAAATGCATCAGCTAA 686204 Query 65567 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 65626 |||||| || ||||| ||||| |||| || ||| |||| ||| ||| || ||||| | Sbjct 686203 TCCTTGGACTCCAATTCCGATGGGTCGGTGCCTCATATTTGAGTTTTTTGCCTCTGGCAC 686144 Query 65627 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACT-TTGACCACAT 65685 ||||||||||| | ||| ||||||||||| ||| |||||| || | || || | Sbjct 686143 TGGATAATAATTTACATCAATAATTTTATTTAGA-TTCTGAGTTATAGTCTTAGTAACTT 686085 Query 65686 CCTTCAGTTTGAGAAAATCAAA---TCGCTCATCTATTACAAACATGTTCAATGCAACAG 65742 |||| | |||| |||| | | | || || | |||||||| || || |||| | Sbjct 686084 CCTTTAATTTGGTGAAATTATATGTTTTGTCCTCATTCACAAACATATTTAAAGCAATTG 686025 Query 65743 ATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAA 65802 |||| ||||| || || || || |||| | | |||| || || |||||||| | Sbjct 686024 ATGCTAGATTGCACACAGCCACTTCATCTGATGAGGTGTATTCTACAATTTCAGTGCACA 685965 Query 65803 GATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCT 65862 || || || || || || || || || | ||| || || ||| | || || | ||| | Sbjct 685964 AGTTGCTGCATTTAATAGTACCCAAGTTCTTTTGGTTGCTTTTTCTATTGCATGAATCTT 685905 Query 65863 TATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGA 65922 ||||||| ||| ||||||| || ||||||| || | ||| ||||| |||||||| | | Sbjct 685904 TATAAAGCATGTATGGAGTTCCTGTTTCAACTTGTGCTTCGATAATAGCTTTCCAAAGAA 685845 Query 65923 CTCGAGC-----CTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAA 65977 || |||| ||| || || | ||||| |||| ||| |||||| Sbjct 685844 CTTGAGCTCTCACTTGTTTCACGAAGCGACCCTCTT-----TTTCATATTTCTCATACAA 685790 Query 65978 TCGTTCGAACTCGTCTCCCCAAACATTGT-CCAATCCAGGACATTCATCCGGACACATCA 66036 ||| || || || |||| |||| | | | | |||||||||||||| || ||||| | Sbjct 685789 AGCTTCAAATTCCTCACCCC-AACAGTCTGCTAGTCCAGGACATTCATGGGGGCACATGA 685731 Query 66037 ACGACCACTCTCCGTCAT--CCTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 66093 ||| ||| | || | ||| |||| |||||| || | ||||| ||||| | || Sbjct 685730 TACTCCAATCT---TGATTGCTTTCTACTCTTTTCATGAACAAGTCAGGTATCCATAAAG 685674 Query 66094 CTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 66152 | ||| |||| ||||||| | ||| || || || || |||||||| | ||| ||| Sbjct 685673 C-ATAGAATAGCTCTCTGGCACGGACTTCTTCTTTCCCAGTGTTCTTTTTCAAATCAAGG 685615 Query 66153 AACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 66212 || | | |||||| |||||| ||||| ||||||||||| | | || || | ||| Sbjct 685614 AATTCAAATATATCAGCATGCCATGGTTCTAAGTATATGGCAAATGCGCCGGGTCTTTTA 685555 Query 66213 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 66272 || ||||| || |||| |||| ||| ||||| || || ||||| ||||| || | | | Sbjct 685554 TTACCTCCTTGGTCTACATATCGAGCAGTGTTGTTGTACACTCTTAACATGGGTACTAGA 685495 Query 66273 CCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAA 66330 ||||| || |||||| || || | ||||| |||| |||| | ||| | | || Sbjct 685494 CCATTAGAGACACCATTTGTACCAGCTATATAAGTTCCCTTTGCTCTAATGCAGT-GTAC 685436 Query 66331 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCAT 66390 ||| |||||||| || || || ||||| || | || ||| |||||||||| |||| Sbjct 685435 ATGA-AGACCTATCCCACCAGCTGACTTAGAAATGAGGGCACATTGTTTTAACGTGTCAT 685377 Query 66391 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 66450 | || ||||| || ||||||||| |||| | ||||| || ||| | ||| | | Sbjct 685376 AAATTCCCTCAATGCTATCATCCCTCATTGCTATAAGAAAGCATGAAGATAATTGTGGTC 685317 Query 66451 GACTAGTTCCCGCATTAAATAAG-GTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGT 66509 | |||| | || | | | ||| || ||| || || ||||| ||||||| || || Sbjct 685316 GTGGAGTTGCTGC-TGAGAAAAGAGTTGGACTTGCATGTGTAAAATATTTTTCTGACAGA 685258 Query 66510 AGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGC 66569 |||||||| || | ||||| || || || ||| ||||||| | || ||| Sbjct 685257 AGATTGTAGGTGTTTATAGCCCCCTCAATGTCTTCGCCATGTATTCCTATAGAAACTCGC 685198 Query 66570 ATTAACATGTGCTGAGGTCTTTC 66592 || | ||| ||||| || ||||| Sbjct 685197 ATGAGCATATGCTGTGGCCTTTC 685175 >seq416 Length=155529 Score = 104 bits (114), Expect = 3e-17 Identities = 158/223 (71%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| |||||| ||| | || ||| || || | ||| ||||| | || ||||| | Sbjct 138917 CCTCATCTCTAGAAATCAGCTCATTGCTGAATGTCAATCCAGGCATCAATCCGCGCTTCT 138858 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | | |||||| || || ||||| ||||| ||||| || ||||| ||||| ||||||| Sbjct 138857 TCATCCAAAAGATTGATGCAAAACTGCCAGAGAAGAATATGCCTTCAACTGCAGCAAAGG 138798 Query 36300 CAATAAGTCTCTCTCCATAACCGGC--ACTGTCATG-TATCCACTTTTGAGCCCAATCGG 36356 |||| | | ||| || | ||| ||| | | |||||||| | ||||| || | Sbjct 138797 CAATGATACGCTCAGCAAATGTGGCTGACTTGCTGGCAATCCACTTCAGGGCCCAGTCAG 138738 Query 36357 CCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 36399 ||||||| || ||||| |||| || || |||||||| || || Sbjct 138737 CCTTCTTCTTCACACAGGGCAGGGTTTCAATAGCATTGAACAG 138695 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 36644 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 36703 || |||| ||| ||||| || || ||||| || || ||||||||||| || ||||| | | Sbjct 137855 TTGGATAGATCGACTTCCTCAACGGTCCAGAACGAAGCCTCTGCCTTCTTGTACATTTCC 137796 Query 36704 CAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 ||||| ||| |||| || ||||| || |||||||| Sbjct 137795 CAGATATCAGGATACTGTATTGGGAATATAACAAA 137761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658164597521480