Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq416 102 8e-17 >seq416 Length=155529 Score = 102 bits (112), Expect = 8e-17 Identities = 128/172 (74%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988 ||||||||| ||||| || || ||||| |||||||| | || || ||||| ||||| Sbjct 138477 AATGTATGTGTCAATGAGCAAAGAGTACATCTCAGAGTGAACATTCTCCATAGCAATCTG 138418 Query 13989 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCC-GAGTAAAATCTTTCTGCCA 14047 || ||||| || ||||| ||||| | | ||| ||||| ||| | || | ||| | | Sbjct 138417 GAATCCATAGAAGCATCTGGCTTCAGTCACTTGCACCTCTTGAG-AGAAGCGTTCCACTA 138359 Query 14048 AGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCA--ATATGTTT 14097 |||| ||||||||||| |||||| || ||||| || |||| | |||||| Sbjct 138358 AGTTCTCATTAACAATGCCATCAGACGCAGCAAAGAAAGCCAGCACATGTTT 138307 Score = 100 bits (110), Expect = 3e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 ||||||||||| ||| || || || ||||| ||||| ||||||||||| || || | Sbjct 138917 CCTCATCTCTAGAAATCAGCTCATTGCTGAATGTCAATCCAGGCATCAATCCGCGCTTCT 138858 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | |||||| |||| || || || || |||||||| || |||||||||||||| | Sbjct 138857 TCATCCAAAAGATTGATGCAAAACTGCCAGAGAAGAATATGCCTTCAACTGCAGCAAAGG 138798 Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAG 13861 | || | || || |||| | ||| ||| | | ||||| || ||||| |||| Sbjct 138797 CAATGATACGCTCAGCAAATGTGGCTGACTTGCTGGCAATCCACTTCAGGGCCCAGTCAG 138738 Query 13862 AtttttttttAATAAAATCCATTGTTTCGATTGCATTGAA 13901 || || || | | | || ||||| || |||||||| Sbjct 138737 CCTTCTTCTTCACACAGGGCAGGGTTTCAATAGCATTGAA 138698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478582835587080