Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq48 100 2e-16 >seq48 Length=1425542 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || ||||| || || |||||||||||||| |||||||| || || ||| || |||| | Sbjct 462537 GGTTTCTCTGTGGAAGGTCAAGAAAATATACAAGAAATATTGTCAAAACAGTTGTACCTA 462596 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 ||||||||| | || |||||| | | | | ||| || |||| ||| | ||| || Sbjct 462597 TGTCAATGTCTCGCAGCTTTGATGCTTGTTAGGACTGGGGGCCATTTTGTCGTGAAACTT 462656 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAAT 4081 || ||| | || || | |||||||| ||| || | || | ||||| |||| |||| || Sbjct 462657 TTTGATGTCTTCACTCTTTTTAGTGTTGGCTTGATTTACATCATGTACAGATGTTTTGAT 462716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276550239614491