Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq492 120 2e-22 seq23 120 2e-22 seq71 118 6e-22 seq255 116 2e-21 seq76 116 2e-21 seq69 116 2e-21 seq387 114 7e-21 seq13 114 7e-21 seq8 114 7e-21 seq59 113 2e-20 seq51 84.2 1e-11 >seq492 Length=126073 Score = 120 bits (132), Expect = 2e-22 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||| | | | |||||||||| |||||||||| ||||||||||||||||||||| Sbjct 6763 AAAAAAAAGTTATAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 6704 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||| ||||||||||||||||||||| Sbjct 6703 GACGCTCTAACCAACTGAGCTAATGGGCCG 6674 >seq23 Length=2188615 Score = 120 bits (132), Expect = 2e-22 Identities = 79/88 (90%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||| | |||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 1493472 TAAAAAGTTTTATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 1493413 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||| Sbjct 1493412 CGCTCTAACCAACTGAGCTAATGGGCCG 1493385 Score = 118 bits (130), Expect = 6e-22 Identities = 82/93 (88%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 11440 TAATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 |||||||||| || |||||||||| |||||||||| |||||||||||||||||| Sbjct 1489752 TAATAAAAAAAGGAACAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAG 1489693 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||| ||||||||||||||||||||| Sbjct 1489692 CACGACGCTCTAACCAACTGAGCTAATGGGCCG 1489660 Score = 118 bits (130), Expect = 6e-22 Identities = 78/87 (90%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| | || |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 1490061 AAAAACTGGAAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 1490120 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||| Sbjct 1490121 GCTCTAACCAACTGAGCTAATGGGCCG 1490147 Score = 118 bits (130), Expect = 6e-22 Identities = 78/87 (90%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| | ||| |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 1495034 AAAAGCTGAAAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 1494975 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||| Sbjct 1494974 GCTCTAACCAACTGAGCTAATGGGCCG 1494948 Score = 116 bits (128), Expect = 2e-21 Identities = 78/88 (89%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||| | | |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 1494495 TAAAAAGTATCAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 1494436 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||| Sbjct 1494435 CGCTCTAACCAACTGAGCTAATGGGCCG 1494408 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1491680 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1491621 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 1491620 TGAGCTAATGGGCCG 1491606 >seq71 Length=1193020 Score = 118 bits (130), Expect = 6e-22 Identities = 79/88 (90%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 11445 AAAAATCA--AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| || |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 322468 AAAAATCTGGAAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 322527 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||| Sbjct 322528 CGCTCTAACCAACTGAGCTAATGGGCCG 322555 >seq255 Length=369863 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 64902 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 64843 Query 11516 TGAGCTAATGGGCCGT 11531 |||||||||||||||| Sbjct 64842 TGAGCTAATGGGCCGT 64827 >seq76 Length=1104369 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 4869 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 4928 Query 11516 TGAGCTAATGGGCCGT 11531 |||||||||||||||| Sbjct 4929 TGAGCTAATGGGCCGT 4944 >seq69 Length=1217979 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 976736 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 976795 Query 11516 TGAGCTAATGGGCCGT 11531 |||||||||||||||| Sbjct 976796 TGAGCTAATGGGCCGT 976811 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 945350 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 945409 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 945410 TGAGCTAATGGGCCG 945424 >seq387 Length=231484 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 128045 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 127986 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 127985 TGAGCTAATGGGCCG 127971 >seq13 Length=2877172 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1003875 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1003816 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 1003815 TGAGCTAATGGGCCG 1003801 >seq8 Length=3096529 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1499948 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1500007 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 1500008 TGAGCTAATGGGCCG 1500022 >seq59 Length=1428883 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 854253 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 854312 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 854313 TGAGCTAATGGGCC 854326 >seq51 Length=1443499 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||| ||||| | ||||||| |||||| |||||||||||||||| ||||| ||||| Sbjct 1104048 TTGGCACATGAGGGACTCGAACCCCCGACCTCCGCGTTATTAGCACGATGCTCTAACCAA 1104107 Query 11515 CTGAGCTAATGGGCC 11529 ||| ||||||| ||| Sbjct 1104108 CTGCGCTAATGTGCC 1104122 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261488022636772