Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq15 116 6e-22 >seq15 Length=2699263 Score = 116 bits (128), Expect = 6e-22 Identities = 174/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||||||||| |||||||| || ||||| |||||||| ||| | | |||| | | || Sbjct 1916204 TCTTCGAGACAACATCCAGGGTATCACGAAGCCAGCCATCAGAAGATTGGCCAGAAGGGG 1916263 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || || | | || ||||| | || ||||| | ||||| |||||||| | || Sbjct 1916264 AGGCGTTAAAAGAATATCCGGATTAATTTACGAAGAAACTCGTGGCGTTTTGAAAGTTTT 1916323 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| | | || |||| ||||| | ||| ||||||||||| ||| | ||||| || Sbjct 1916324 CCTAGAAAATGTCATCCGAGATGCCGTGACCTACACCGAGCACGCGAAAAGAAAGACGGT 1916383 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||||| | |||||||| ||||| | ||||| | | |||||||||| || Sbjct 1916384 GACAGCTATGGACGTTGTCTATGCTTTGAAGAGACAAGGAAGGACTCTTTATGGTTTCGG 1916443 Query 16693 AAGTTAA 16699 | | ||| Sbjct 1916444 AGGCTAA 1916450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074288435921