Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_006642.1 Length=14286 Score E Sequences producing significant alignments: (Bits) Value seq43 102 7e-18 >seq43 Length=1563633 Score = 102 bits (112), Expect = 7e-18 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 11187 TCCACCAACAAACCTTTAATTTTCCTACACATATTACAAACTTCCCCCTCTCCATTCATa 11246 |||||||||| | |||||| || ||||||| ||||||| | || | ||||| ||| Sbjct 1394044 TCCACCAACATATCTTTAAATTGTGTACACATTTTACAAATCTTGGCCACCCCATTTATA 1393985 Query 11247 aaaaaaGGGGTTGCACACACTTACCCGCTAAGCACAGTTACTTCACGTGAC 11297 || ||||||||||| |||||||||||||| |||||||||| ||| |||| Sbjct 1393984 AATAAAGGGGTTGCGCACACTTACCCGCTGCGCACAGTTACCCCACATGAC 1393934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 45596274368639