Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_006659.1 Length=41573 Score E Sequences producing significant alignments: (Bits) Value seq227 288 3e-73 seq235 242 1e-59 >seq227 Length=399343 Score = 288 bits (318), Expect = 3e-73 Identities = 273/347 (79%), Gaps = 5/347 (1%) Strand=Plus/Minus Query 40131 GAATAACTTTTAAACGGCTTTACCGATTAATTCCAAAAACTAATTAGCTCTTAACATTAA 40190 ||||||||||||| |||||||| ||||||| | ||||||||||| || || | || | Sbjct 222614 GAATAACTTTTAACCGGCTTTATCGATTAACTTCAAAAACTAATCCGCCTTTGAGCTTGA 222555 Query 40191 TAAACCACGTCGATTGCTGTCAGCCCGGTCAACATCGGTTGATTCGTTCGTGAGTTATCG 40250 ||||||||||||| || || | ||||| ||||||||||||||||| ||| ||||| Sbjct 222554 AAAACCACGTCGATCGCCACCAAGCTGGTCAGAATCGGTTGATTCGTTCGAGAGATATCG 222495 Query 40251 TTGACGAAAGAAAACCGAAAAAAGTGTTTTTTCGGAATTACTCCGAAATTCGTGGTTCAA 40310 | |||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||| | Sbjct 222494 TGAACGAAAGAAACCCG-AAAAAGTGTTTTTTCGGGATTACTCCGAAATTTGTGGTTCGA 222436 Query 40311 TCAAATTGAACTTAAAGATTTTTTATGAGGCTTAAAAAATTGCGTTGAAT----GTCACC 40366 ||| | || | || ||| ||| || | | | |||| ||||| |||| | || Sbjct 222435 ACAATTAAAATTGCAAAATTACTTACGATGATGATAAAACTGCGTCGAATGGTGGGTGCC 222376 Query 40367 AACCGCGTAAAAATCGTTCCATTTATTCAAAAGTTATCGCGGTTTGAAAATTTAAAAAAT 40426 |||||||| ||||| | | || ||||||||||||| |||||||| ||||| |||||| Sbjct 222375 AACCGCGTGAAAATTGGTTGATCCATTCAAAAGTTATTGCGGTTTGGAAATTCCAAAAAT 222316 Query 40427 AGTGTTGTATCAAACTTCTATCAGACTTTTGAGCTCGAAGAGCTAAA 40473 |||||| ||| |||||| ||||||||||| ||||| |||||| || Sbjct 222315 AGTGTTCTATGAAACTTTTATCAGACTTTCGAGCTGAGAGAGCTCAA 222269 >seq235 Length=395217 Score = 242 bits (268), Expect = 1e-59 Identities = 224/282 (79%), Gaps = 9/282 (3%) Strand=Plus/Plus Query 40192 AAACCACGTCGATTGCTGTCAGCCCGGTCAACATCGGTTGATTCGTTCGTGAGTTATCGT 40251 ||||||||||||| || || | ||||| ||||||||||||||||| ||| |||||| Sbjct 16680 AAACCACGTCGATCGCCACCAAGCTGGTCAGAATCGGTTGATTCGTTCGAGAGATATCGT 16739 Query 40252 TGACGAAAGAAAACCGAAAAAAGTGTTTTTTCGGAATTACTCCGAAATTCGTGGTTCAAT 40311 |||||||||| |||||||| |||||||||||| |||||||||||||| ||||||| | Sbjct 16740 GAACGAAAGAAACCCGAAAAA-GTGTTTTTTCGGGATTACTCCGAAATTTGTGGTTCGAA 16798 Query 40312 CAAATTGAACTTAAAGATTTTTTATGAGGCTTAAAAAATTGCGTTGAATGTCACCAACCG 40371 ||| ||||| ||| ||| |||| | | |||| ||||| ||||| ||||||| Sbjct 16799 CAA-------TTAAA-ATTGCTTACGAGGATGATAAAACTGCGTCGAATGGTGCCAACCG 16850 Query 40372 CGTAAAAATCGTTCCATTTATTCAAAAGTTATCGCGGTTTGAAAATTTAAAAAATAGTGT 40431 ||| ||||| | | || ||||||||||||| |||||||| ||||| ||||||||||| Sbjct 16851 CGTGAAAATTGGTTGATCCATTCAAAAGTTATTGCGGTTTGGAAATTCCAAAAATAGTGT 16910 Query 40432 TGTATCAAACTTCTATCAGACTTTTGAGCTCGAAGAGCTAAA 40473 | ||| |||||| ||||| ||||| ||||| |||||| || Sbjct 16911 TCTATGAAACTTTTATCAAACTTTCGAGCTGAGAGAGCTCAA 16952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132910426404990