Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq401 111 2e-19 >seq401 Length=172835 Score = 111 bits (122), Expect = 2e-19 Identities = 225/328 (69%), Gaps = 7/328 (2%) Strand=Plus/Minus Query 131852 AAGATTAATCCTA-TGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGA 131910 |||||||| | || ||||||| || ||||||||||||||| | ||| |||| | || Sbjct 20953 AAGATTAAGCTTAATGACTCCGGTATTACCTATGTTGGCTGAAGCTTGCAAATCAGTGGA 20894 Query 131911 AAAAGCAATAGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCG 131970 || ||||| | |||| | | ||||||| ||||||| |||||||||| || || | Sbjct 20893 AATGGCAATGAAGAAATGTCCTAACGGAATGTTTTCAGAGATAAAATATGACGGTGAAAG 20834 Query 131971 TGTACAAATTCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGT 132030 ||||| | |||||||||| |||| | || ||||| ||| ||||||||||| Sbjct 20833 AGTACAGGTGCATAAAAAAGGGAATGAGTTTAAATATTTCTCGAGAGCATTAAAACCTGT 20774 Query 132031 TCTTACTCATAAAATTGATGGATTTGATAAACTGTTGACTG-ATGCATTTCCCACAGCAA 132089 | | | ||| ||| | | |||| | | | | || || | | ||||| || | | | Sbjct 20773 TATGGCACAT-AAAGTCAGTCATTTTAAAGATTATTTACCGCAAGCATTCCCAAAGGGGA 20715 Query 132090 AAAACTTCATTTTAGATGCGGAATTAATAATGATAGATACAAAATCA--AATTCATTTTT 132147 | || ||| | ||||| ||| | | ||| ||||| || || || | ||| Sbjct 20714 CCGATTTGATTCTTGATGCTGAAGTTTTGATGGTAGATGTGAATACAGGAAAGC--CTTT 20657 Query 132148 ACCATTTGGTTCATTAGGTATACATAAA 132175 ||||||||| || ||||||| |||||| Sbjct 20656 GCCATTTGGTACACTAGGTATCCATAAA 20629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531894171186280