Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq434 230 2e-55 seq33 127 2e-24 seq12 89.7 5e-13 >seq434 Length=190249 Score = 230 bits (254), Expect = 2e-55 Identities = 799/1226 (65%), Gaps = 48/1226 (4%) Strand=Plus/Minus Query 62039 AAAGTCGTTGCCGCATATTTTGTCGAATGGGGCGTTTATCCTAGAAACTTTCCTGTAGAT 62098 || || |||| ||| || || |||||||||||||| || || || || || || || || Sbjct 114825 AAGGTTGTTGGCGCTTACTTCGTCGAATGGGGCGTCTACCCCAGGAAGTTCCCCGTCGAC 114766 Query 62099 CGAGTGCCTACTCCTAATCTATCGCATGTTCTCTATGGATTTATTCCTATATGCGGCGGC 62158 || || || | || ||||| | ||| |||| || || || || || || ||||| || Sbjct 114765 CGCGTACCCATCCCGAATCTTACCCATCTTCTGTACGGTTTCATCCCAATCTGCGGTGGA 114706 Query 62159 GACGGCATTAACGACAGTCTCAAGACCATAACCGGTAGTTTTGAAGCTCTTCAGCGGTCG 62218 || ||||| ||||||||| | || || || ||||| ||||||| || || || Sbjct 114705 GATGGCATCAACGACAGTTTGAAAGAAATCGAAGGCAGTTTCCAAGCTCTGCAACGATCC 114646 Query 62219 TGTTCGGGTCGAGACGACTTTAAAGTGTCGATTCATGACCCGTGGGCTGCCGTCCAGAAA 62278 || || | || ||||| ||||| ||||| || ||||| ||||| || | |||||| Sbjct 114645 TGCAGCGGCAGGGAAGACTTCAAAGTATCGATCCACGACCCTTGGGCAGCTCTTCAGAAA 114586 Query 62279 CCACAAAAACAAGTAACCGCTTGGAACGAACCATACAAAGGTAATTTTGGTCAATTGATG 62338 |||||||| | | | ||||| ||||| ||||| ||||| || || || ||||| Sbjct 114585 CCACAAAAGGGTTTGGCGTCCTGGAATGAACCCTACAAGGGTAACTTCGGCCAGCTGATG 114526 Query 62339 GCAGCCAAACTGGCGAATCCTCACATTAAAGTGTTACCTTCGATAGGCGGCTGGACATTA 62398 |||| ||| | ||| || | || | |||||||| | || |||||||| || Sbjct 114525 ATGTTGAAACAGGCAAGACCTGACCTGAAGATCTTACCTTCCGTTGGTGGCTGGACCTTG 114466 Query 62399 TCCGATCCGTTCTTTTATTTTCAC-GATGTGGCCAAACGCAAGATTTTTGTCGATTCCGT 62457 | ||||| ||||| | | ||||| || || || | ||| || ||||| || || Sbjct 114465 GCTGATCCATTCTTCT-TCTTCACTGACAAGGTTAAGAGGAAGCGCTTCGTCGACTCTGT 114407 Query 62458 CATAGAATTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGATTGGGAGTTTCC 62517 | || || | | ||||||||||| ||||| || || |||||||| |||||||| || Sbjct 114406 TAAGGACTTCCTTGAAACCTGGAAATTCTTCGACGGAGTGGACATCGACTGGGAGTTCCC 114347 Query 62518 CGGCGGGAAAGGCGCCAATCC----CAACGTAGGC--GACGTCGAACGCGATCGCGAAAC 62571 || || || ||||| || || | |||| | |||| || | | ||| || Sbjct 114346 TGGTGGTAAGGGCGCTAACCCTGATCTCGGTAGCCCTGACGACGGTCAC-ATC----TAC 114292 Query 62572 GTACACGATTCTGTTGAGAGATTTACGCGAAGCCCTCGA----CCGTCTCTCAATCGAAA 62627 || ||| ||| ||| || | | || ||| | | |||| ||| || | Sbjct 114291 GT---CGA-GCTGATGAAGGAACTGAGAGAGATGCTCAACGAGCTGTCTGCCAA--GACA 114238 Query 62628 CGAATCGAACGTACGAATTGACTAGCGCGATCAGCGCCGGCGATGACAAAATTGCCGTAG 62687 | | ||| |||||| ||||| || |||||| | || ||||| ||| || | Sbjct 114237 GGCA-AGAA-ATACGAACTGACTTCAGCCATCAGCTCTGGTTGGGACAAGATTCAGGTGG 114180 Query 62688 TCGATTACACTGAAGCGCAAAAATATTTGGATTATAtttttttAATGACATACGATTTCA 62747 | || |||| | || ||| | || ||||| | || || || |||| || || |||| Sbjct 114179 TAGACTACAAGGCGGCTCAACAGTACATGGATCACATCTTCTTGATGAGCTATGACTTCA 114120 Query 62748 AAGGAGCTTGGTCGAATAGCGATTTGGGATATCAAACGACTCTGTACGCGCCTTCGTTTA 62807 | ||||||||||| || | | | || | ||| | ||||| |||| || | | | Sbjct 114119 AGGGAGCTTGGTCAAACGACACTCTTGGCCACCAAGCTGCTCTGCACGCTCCCGCATGGA 114060 Query 62808 ACCCTAAAGAGCATTATACGACCGATTT---TGCC--GTTCGTGCTATGCTCAAGCAAAA 62862 |||| || ||| ||| || || || || || | ||| || | ||||| | | Sbjct 114059 ACCCCAAGGAGACTTACACAACTGACTTCGGTGTCAAATTCCTG-TTGGCTCAGGGAGTC 114001 Query 62863 AGTCGAAAACAAAAAGATTATAGTCGGCGTGGCCATGTACGGTCGAGGTTGGACCGGCGT 62922 |||| || ||||| | || || || || |||||||| || |||||||| || || Sbjct 114000 AGTC----CTAAGAAGATCGTCGTTGGTGTTGCTATGTACGGCCGTGGTTGGACTGGAGT 113945 Query 62923 CGGTGACTTTGTCGACGAAAATAATCCATTTTCCGGCACGGCTAAGGGACCGATCAAAGG 62982 | || | | | || ||||||||| | || |||| || || |||| || Sbjct 113944 C---AACGGTTACAAAGACGGTAATCCATTCACTGGTGTAGCTACTGGCCCAGTCAAGGG 113888 Query 62983 TACCTGGGAGGACGGAGTCGTCGATTATAGAGAGATTTTTAATTCTTTTGTGGGTAAAGA 63042 ||||||| |||| || || || || || |||||||| ||| || | | ||| Sbjct 113887 TACCTGGCAGGATGGTGTAGTGGACTACAGAGAGATAGCCAATGAGATT---GCTCAAGG 113831 Query 63043 C----GGCATTAATCGTTACGATTCCATCGCAAAAGCGGCATACGTCTTTAATAACGCGA 63098 | || | | | | ||| || | || |||| | ||||| |||| || | || Sbjct 113830 CAAGTGGGAGT-ACCATTATGACAAAGTGGCTCAAGCACCTTACGTATTTAGGAAGGAGA 113772 Query 63099 CCGGCGATCTCATAACCTACGACAGTCCTCAG-TCGGTTCTGGATAAAGCAAAATATGTT 63157 | || || || || || || || | | ||| ||| | || || || |||||||| Sbjct 113771 CTGGTGACCTAATTACATATGA-TGACGCCAGATCGACAATTGAAAAGGCCAAATATGTG 113713 Query 63158 TTGGACTATAATCTGGGTGGTCTGTTCGCGTGGGAGATCGATGCTGACAACGGATTGCTT 63217 | | |||| || || ||||| ||||| ||||| || ||||| ||||| || | Sbjct 113712 AGGAATAATAAGCTAGGAGGTCTATTCGCATGGGAAATAGATGCAGACAATGGTGATATA 113653 Query 63218 CTAAACGCAATGAACAGCGGTCTCGG 63243 ||||| || ||||| | ||||| || Sbjct 113652 CTAAATGCCATGAATATGGGTCTTGG 113627 >seq33 Length=1899332 Score = 127 bits (140), Expect = 2e-24 Identities = 544/846 (64%), Gaps = 29/846 (3%) Strand=Plus/Minus Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173 || ||||| || || | ||||| || || || || | ||||||||||| ||||||||| Sbjct 686937 ACAGTGAACTGGATAGCATTTGCGGCTGGCTTCGTGCGTAAATAGTACATTCCCGTTTTT 686878 Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTA---TAGGTTGGATTG 147230 || ||| ||| ||| | |||| ||||| |||| || |||| || |||| | Sbjct 686877 AAGCCCATTTTCCACGCATAGAAATGAATAGATGTCAA---TTTACCATAATTTGGTTCA 686821 Query 147231 GCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATG 147290 || ||| || ||||| |||||||||||||| || | | || | || || ||||| Sbjct 686820 GCAACATGAATATTGAAGGATTGGCTCTGATCAATAAATGCCCCTCTGTCAGCAGCCATT 686761 Query 147291 TCCAACACTACTTTTTGTTTAATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGTGT 147350 | | | |||| | |||||| | || || | | || | |||| | Sbjct 686760 TGTATTGTTGTTTTTACAGACACTTCCCAGACAGTTTTATATAAGTCCCTTATATCTTTA 686701 Query 147351 GGAATTTCATCAATATTTTGTACAGATCCGTTGTTTT---TAATAATTTTTATCATGATA 147407 |||||| | ||||||||||| | |||||| || || | | |||| ||| |||| || Sbjct 686700 GGAATTGCTTCAATATTTTGAATAGATCCATTATTGTGGATGATAAGATTTTTCAT-ATC 686642 Query 147408 TCTGTCGAATATACGTTGGTGTCTACGAGTTTA---TCG-ACGAGATGCTGATTGACCAC 147463 | || ||| | | | || |||| | ||| | | ||| ||||| || || Sbjct 686641 TTCATCCCATAAA--TCAGCTTC----AGTTAAATCTCGTAACAAATGATGATTAACAAC 686588 Query 147464 TTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGA 147523 ||| | || || |||| |||| || || | || |||||| || || || || Sbjct 686587 TTGGAATTCACCTGACAAGACTCGTCTCTGATAAATGTTGGAAGTAAATGGTTCAAATGA 686528 Query 147524 CTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGA 147583 || || || || | || || ||||| | ||| || ||||| ||| | |||| || Sbjct 686527 TTCATTATTTCCCAATATTTGAGCAGTGGATGCAGTTGGCATTGGAGCTAATAATAGGGA 686468 Query 147584 ATTGCGTAAG-CCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATCAT 147642 ||| | |||| || || | || |||| | || || |||| ||||| | || Sbjct 686467 ATTTC-TAAGACCATGTTTGGCAATTTTTTCTTTGAGTGACACCCAATTCCACAAGTCTG 686409 Query 147643 TCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCAT 147702 | | |||| ||||||||| |||| | || || | || ||| ||||| | || | Sbjct 686408 TGGG--GGTTT-TATTCCACATATCATATTGCAATATACCTTGACTGGCAGGACAGCCTT 686352 Query 147703 CGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTT--AGTGCACC 147760 | |||| || || || | | | ||||| || ||| | ||| ||||| || Sbjct 686351 CATAAGTCTCATAGACGCCATACTTCTCAGCTAACTCACAACT--GGCTTCTAGTGCCCC 686294 Query 147761 ATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCTCTTGGCTGTCGTAGGG 147820 ||||||||| ||||| | || | || |||||| | | || | | || ||||| || Sbjct 686293 ATAATAAATTGTTTCAAATATTTGTTGATTTAATTTAATTGCTGCCTCACTTTCGTAAGG 686234 Query 147821 CATATCCAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGGTG 147880 ||| || | | || | ||| || | |||||| | || || |||||||||||||| Sbjct 686233 TATACGCATTAAAACAAATGCATCAGCTAATCCTTGGACTCCAATTCCGATGGGTCGGTG 686174 Query 147881 TCTGAAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTTATT 147940 || | ||| || || || | || |||||| |||| | || ||||||||||| Sbjct 686173 CCTCATATTTGAGTTTTTTGCCTCTGGCACTGGATAATAATTTACATCAATAATTTTATT 686114 Query 147941 GAGATT 147946 ||||| Sbjct 686113 TAGATT 686108 >seq12 Length=2918994 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || ||||| ||||||||| | ||||| | || ||||| | Sbjct 2425114 ATGCAGATTTTCGTGAAGACATTGACTGGAAAAACCATCACTCTGGAGGTAGAACCTTCT 2425173 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || ||| | || || ||||| ||||| ||||| || || || || || Sbjct 2425174 GACACTATTGAGAATGTAAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCTGACCAG 2425233 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || || | || |||||| || || ||||||| | | | |||||||||| Sbjct 2425234 CAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGACGCACTCTTTCCGACTATAAC 2425293 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || |||||||| | || |||||||| | || |||| || Sbjct 2425294 ATTCAGAAGGAATCTACCCTTCACTTGGTCCTGCGTCTGCGAGGTGG 2425340 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823 |||| ||||| | ||||| || || || || || ||| | || || | || | ||| Sbjct 2853154 ACAACATGCAGATCTTTGTGAAGACTTTGACGGGGAAAACCATAACATTAGAGGTGGAAC 2853095 Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883 | || ||||| || | || ||| ||| ||| || || ||||| || ||||||| Sbjct 2853094 CCTCTGATACCATTGAAAACGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCTCCCG 2853035 Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACT 26943 ||||||| ||| | || | || ||| |||||| | ||||||| | | | ||||| Sbjct 2853034 ATCAACAGAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGCACTCTTTCCGACT 2852975 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | || || || || || |||||| | ||||| || ||| | || ||||| || Sbjct 2852974 ACAATATCCAGAAGGAGTCTACTCTTCATCTCGTGCTGCGTCTCAGAGGTGG 2852923 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 || |||||| | ||||| ||||| || || || ||| | ||||| | ||| | || | Sbjct 2423058 CATAATGCAGATTTTTGTGAAAACCTTGACGGGTAAAACTATCACTCTTGAAGTTGAGCC 2423117 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | |||||| || || | || ||| || ||| ||||||||||| || || || || Sbjct 2423118 ATCCGACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGCATTCCCCCAGA 2423177 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG-AAAC-GTCAGCGAC 26942 ||| || |||| || | || || || || | ||||| | | | | || ||| ||| Sbjct 2423178 TCAGCAGCGACTGATCTTCGCTGGAAAGCAGTTAGAAGACGGTCGCACACTGTC--TGAC 2423235 Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 || ||||| |||||||||||||| |||| || || ||| Sbjct 2423236 TACAACATCCAAAAAGAATCTACGCTCCACCTTGTTCTG 2423274 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| | ||||| || | || ||| ||||| | || | Sbjct 2423290 ATGCAGATTTTCGTTAAAACGCTTACTGGTAAGACAATTACCCTCGAAGTCGAGCCTTCA 2423349 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || |||||| | || || || ||| ||||||||||| || || || || || Sbjct 2423350 GATACTATCGAGAATGTTAAGGCTAAAATTCAAGACAAAGAAGGTATCCCACCAGACCAG 2423409 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||| | || | | |||||| || || ||||||| | | | || ||||| ||| Sbjct 2423410 CAAAGGTTGATCTTTGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTCTCTGACTACAAC 2423469 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| ||||| || | || ||||||||| | || |||| || Sbjct 2423470 ATTCAAAAGGAATCCACCCTTCACCTGGTCCTGCGTCTGCGAGGTGG 2423516 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| |||||||| ||| | || || | ||| | ||| | Sbjct 2849971 ATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACATTAGAAGTTGAACCCTCT 2849912 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| || ||| || || || || || || || |||||| Sbjct 2849911 GACACAATTGAAAACGTGAAAGCCAAAATTCAAGATAAGGAGGGAATTCCACCAGATCAA 2849852 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | |||| || ||||| || || ||||| | | | | ||| || || Sbjct 2849851 CAAAGATTGATTTTCGCTGGCAAGCAGCTTGAAGACGGGCGCACTCTTTCCGATTACAAT 2849792 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||||| ||||| || | ||| | || || || | ||||| |||| Sbjct 2849791 ATTCAAAAGGAATCAACACTTCATTTAGTTCTAAGGTTGAGAGGTGGAA 2849743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478656434669840