Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq434 187 2e-42 seq33 123 2e-23 seq12 91.5 1e-13 >seq434 Length=190249 Score = 187 bits (206), Expect = 2e-42 Identities = 338/492 (69%), Gaps = 2/492 (0%) Strand=Plus/Minus Query 55824 GTTGCCGCATATTTTGTCGAGTGGGGTGTTTATCATAGAAACTTTCCTGTCACTCGAGTT 55883 |||| ||| || || ||||| ||||| || || | || || || || ||| || || Sbjct 114819 GTTGGCGCTTACTTCGTCGAATGGGGCGTCTACCCCAGGAAGTTCCCCGTCGACCGCGTA 114760 Query 55884 CCCACTCCTAATCTGTCACACATTCTCTACGGATTCATACCGATATGCGGCGGCGACGGC 55943 |||| || ||||| | || |||| ||||| ||||| || || ||||| || || ||| Sbjct 114759 CCCATCCCGAATCTTACCCATCTTCTGTACGGTTTCATCCCAATCTGCGGTGGAGATGGC 114700 Query 55944 ATTAACGACAGTCTCAAGACGATAACCGGTAGTTTTGAAGCGCTTCAGCGATCGTGTTCG 56003 || ||||||||| | || || || ||||| |||| || || ||||| || Sbjct 114699 ATCAACGACAGTTTGAAAGAAATCGAAGGCAGTTTCCAAGCTCTGCAACGATCCTGCAGC 114640 Query 56004 GGTCGAGACGACTTCAAAGTGTCGATTCATGACCCGTGGGCTGCGGTCCAAAAGCCCCAA 56063 || | || ||||||||||| ||||| || ||||| ||||| || | || || || ||| Sbjct 114639 GGCAGGGAAGACTTCAAAGTATCGATCCACGACCCTTGGGCAGCTCTTCAGAAACCACAA 114580 Query 56064 AAACAAGTGACCGCATGGAACGAACCATACAAAGGCAACTTTGGACAATTGATGGCAGCT 56123 || || | | ||||| ||||| ||||| || ||||| || || ||||| Sbjct 114579 AAGGGTTTGGCGTCCTGGAATGAACCCTACAAGGGTAACTTCGGCCAGCTGATGATGTTG 114520 Query 56124 AAACTGGCGAATCCCCATGTTAAAGTGCTGCCTTCGATCGGTGGCTGGACTTTATCCGAT 56183 |||| ||| | || | | || | | ||||| | ||||||||||| || | ||| Sbjct 114519 AAACAGGCAAGACCTGACCTGAAGATCTTACCTTCCGTTGGTGGCTGGACCTTGGCTGAT 114460 Query 56184 CCGTTCTTTTACTTTCAC-GATGCGGTCAAACGCAAAATTTTTGTCGATTCTGTCGTCGA 56242 || ||||| | | ||||| || ||| || | || || ||||| ||||| || Sbjct 114459 CCATTCTTCTTC-TTCACTGACAAGGTTAAGAGGAAGCGCTTCGTCGACTCTGTTAAGGA 114401 Query 56243 GTTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGACTGGGAGTTTCCCGGCGG 56302 || | | ||||||||||| ||||| || || ||||||||||||||||| || || || Sbjct 114400 CTTCCTTGAAACCTGGAAATTCTTCGACGGAGTGGACATCGACTGGGAGTTCCCTGGTGG 114341 Query 56303 AAAGGGGGCCAA 56314 ||||| || || Sbjct 114340 TAAGGGCGCTAA 114329 >seq33 Length=1899332 Score = 123 bits (136), Expect = 2e-23 Identities = 496/765 (65%), Gaps = 36/765 (5%) Strand=Plus/Minus Query 132199 ATGTTGATTTACTATTTGATATTCACCCGATAAGACTCTTCGTACGTACAAATTACTAGT 132258 ||| ||||| || | ||| ||||||| || ||||||| || || | || ||| Sbjct 686602 ATGATGATTAACAACTTGGAATTCACCTGACAAGACTCGTCTCTGATAAATGTTGGAAGT 686543 Query 132259 AAACGGCTCGAACGATTCGTTGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCA-TGT 132317 ||| || || || ||||| || ||||||||||||||||| || | ||| || |||| || Sbjct 686542 AAATGGTTCAAATGATTCATTATTTCCCAATATTTGAGCAGTGGATGCAGTTGGCATTGG 686483 Query 132318 AGGCAATCAATAATGAATTGCGCAGCCCGTGTATGGCCATTTGCCGTTTAAGCTCGTCCC 132377 || ||| |||| ||||| | || || ||| |||| |||| ||| || ||| Sbjct 686482 AGCTAAT-AATAGGGAATTTCTAAGACCATGTTTGGCAATTTTTTCTTTGAGTGACACCC 686424 Query 132378 AGTTCCACAGATCATTCGATTGAGAGATATTCCACAAATCAAACTGTAAATGACCGCTAC 132437 | ||||||| || | | | | ||||||||| |||| | || || ||| || Sbjct 686423 AATTCCACAAGTCTGTGG---GGGTTTTATTCCACATATCATATTGCAATATACCTTGAC 686367 Query 132438 TTGCAGGAGATCCGTTATAAGAATCGTATGCTCCGTGTAATTTGGCAAGT-TCTATGCTC 132496 | |||||| | || | ||||| || || | || | | || || | || | Sbjct 686366 TGGCAGGACAGCCTTCATAAGTCTCATAGACGCCAT---ACTTCTCAGCTAACTCACAAC 686310 Query 132497 TGACT--CAGGGCACCATAATAAATAGTCTCTGAGATTTTTCTATTCAATTCCCTTGCTT 132554 || || || || ||||||||||| || || | |||| | ||| |||| ||||| Sbjct 686309 TGGCTTCTAGTGCCCCATAATAAATTGTTTCAAATATTTGTTGATTTAATTTAATTGCTG 686250 Query 132555 GTTGACTGTCGTAGGGCAAA---TTTAAAATAGCGAACGCATCGGCAAGTCCCTGAATGC 132611 | ||| ||||| || | | |||||| | || ||||| || | ||| || | | Sbjct 686249 CCTCACTTTCGTAAGGTATACGCATTAAAA---CAAATGCATCAGCTAATCCTTGGACTC 686193 Query 132612 CGATACCGATGGGTCTATGTTTAAAATTCGATACTTGTGCGCTAGTCAGCGGATAAAAGT 132671 | || |||||||||| || | | ||| || || ||| | || |||||| | | Sbjct 686192 CAATTCCGATGGGTCGGTGCCTCATATTTGAGTTTTTTGCCTCTGGCACTGGATAATAAT 686133 Query 132672 TTTTGTCTATTATTTTATTGAGATTGTTAGTGACAACTCTAGCCACTTTATATAGCGAT- 132730 || || || |||||||| ||||| | ||| | | ||| |||| | || || Sbjct 686132 TTACATCAATAATTTTATTTAGATTCTGAGTTATAGTCTTAGTAACTTCCTTTA---ATT 686076 Query 132731 ---TCAAAGTCAAAGTTTTTAGTCCTTTTGTTGGCAAAACAATTGACGGCAATCGAGGCC 132787 | ||| | | ||||| |||| | || |||| ||| | ||||| || || Sbjct 686075 TGGTGAAATTATATGTTTT--GTCC--TCATTCACAAACATATTTAAAGCAATTGATGCT 686020 Query 132788 AAATTGCATACGGCTGTCTCTT--TATTAT-CGCTATACTGTACGATTTCTGCACACAAA 132844 | |||||| || || | ||| | | || | | || | ||| ||||| | ||||| Sbjct 686019 AGATTGCACACAGC---CACTTCATCTGATGAGGTGTATTCTACAATTTCAGTGCACAAG 685963 Query 132845 TTACTGTTTCGAATAACTCCCAAGtttttttGATTG-TTTTTCTCGTTTACGTTATCTTT 132903 || ||| | |||| |||||||| ||||| ||| ||||||| | | | |||||| Sbjct 685962 TTGCTGCATTTAATAGTACCCAAGTTCTTTTGGTTGCTTTTTCTATTGCATG-AATCTTT 685904 Query 132904 ATGCAACATGTACGGACCTCCGGTTTCGACCTGAATTTCGATAAT 132948 || | |||||| ||| ||| ||||| || || ||||||||| Sbjct 685903 ATAAAGCATGTATGGAGTTCCTGTTTCAACTTGTGCTTCGATAAT 685859 >seq12 Length=2918994 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 || |||||| | ||||| ||||| || || || ||| | || || | ||||| ||| | Sbjct 2423058 CATAATGCAGATTTTTGTGAAAACCTTGACGGGTAAAACTATCACTCTTGAAGTTGAGCC 2423117 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 |||||| || || | || ||| || ||| |||||||||||||| || || || Sbjct 2423118 ATCCGACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGCATTCCCCCAGA 2423177 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGAAAC-GTCAGCGAT 24164 ||| ||| ||||||| | || || ||||| | ||||| | | | || ||| || Sbjct 2423178 TCAGCAGCGACTGATCTTCGCTGGAAAGCAGTTAGAAGACGGTCGCACACTGTC--TGAC 2423235 Query 24165 TATAACATTCAAAAAGAATCTAC 24187 || ||||| |||||||||||||| Sbjct 2423236 TACAACATCCAAAAAGAATCTAC 2423258 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| | ||||| || | |||||| ||||||||||| | Sbjct 2423290 ATGCAGATTTTCGTTAAAACGCTTACTGGTAAGACAATTACCCTCGAAGTCGAGCCTTCA 2423349 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || |||||| | || || || ||| ||||||||||| || || || || || Sbjct 2423350 GATACTATCGAGAATGTTAAGGCTAAAATTCAAGACAAAGAAGGTATCCCACCAGACCAG 2423409 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || |||| | | ||||||||| || ||||||| | | | || || || ||| Sbjct 2423410 CAAAGGTTGATCTTTGCCGGCAAGCAGCTGGAAGATGGGCGCACCCTCTCTGACTACAAC 2423469 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 |||||||| ||||| || |||| Sbjct 2423470 ATTCAAAAGGAATCCACCCTTCA 2423492 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || ||||| || || ||||||||| | || ||| | ||||| ||| | Sbjct 2424658 ATGCAGATTTTCGTAAAGACCTTGACTGGAAAAACCATCACCCTAGAAGTTGAGCCTTCT 2424717 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || |||||||| | || || ||||| ||||| ||||| || || || || || Sbjct 2424718 GATACCATCGAAAACGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 2424777 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | | ||||||||| || ||||||| ||| | | ||||| || Sbjct 2424778 CAGCGTCTTATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTTTCTGATTACAAT 2424837 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || || ||||||||||| |||| || || || Sbjct 2424838 ATCCAGAAAGAATCTACCCTTCACTTGGTCTT 2424869 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || ||||| ||||||||| | || || | ||||| ||| | Sbjct 2423518 ATGCAGATTTTCGTGAAGACATTGACTGGAAAAACCATCACTCTTGAAGTTGAGCCTTCT 2423577 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || ||| | || || ||||| ||||| || || || || || || || Sbjct 2423578 GACACTATTGAGAATGTAAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 2423637 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | | ||||||||| || ||||||| | | | | ||||| ||| Sbjct 2423638 CAGCGTCTTATCTTTGCCGGCAAGCAGCTTGAAGATGGACGCACCCTTTCTGATTACAAC 2423697 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || |||||||||||||| |||| || || || Sbjct 2423698 ATCCAAAAAGAATCTACCCTTCACTTGGTCTT 2423729 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045 |||| ||||| | ||||| || || || || || ||| | || || | || || || Sbjct 2853154 ACAACATGCAGATCTTTGTGAAGACTTTGACGGGGAAAACCATAACATTAGAGGTGGAAC 2853095 Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 || || ||||| || | || ||| ||| ||| || || |||||||| ||||||| Sbjct 2853094 CCTCTGATACCATTGAAAACGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCTCCCG 2853035 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 ||||||||||| |||| | || ||| || ||| | ||||||| | | | ||| | Sbjct 2853034 ATCAACAGAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGCACTCTTTCCGACT 2852975 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 | || || || || || ||||| ||||| | ||| Sbjct 2852974 ACAATATCCAGAAGGAGTCTACTCTTCATCTCGTG 2852940 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || ||||||||||| ||||| ||| | || || | || || ||| | Sbjct 2852921 ATGCAAATTTTCGTAAAAACATTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTCT 2852862 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || ||| || || || || || || || || || ||||| Sbjct 2852861 GACACAATCGAAAATGTTAAAGCCAAAATCCAGGATAAGGAGGGTATCCCACCTGATCAG 2852802 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || || |||| | | |||||| || | ||||||| | || | | | || || || Sbjct 2852801 CAACGATTGATCTTTGCCGGCAAACAGTTGGAAGATG-GACGCACATTATCAGACTACAA 2852743 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || |||||||||||||| |||| ||||| || | ||| | |||||| Sbjct 2852742 TATCCAAAAAGAATCTACCCTTCACTTAGTATTGCGTTTGCGCGGAGGA 2852694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429930775874535