Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq416 154 2e-32 seq344 132 5e-26 seq132 132 5e-26 seq53 132 5e-26 seq8 132 5e-26 seq51 129 7e-25 >seq416 Length=155529 Score = 154 bits (170), Expect = 2e-32 Identities = 176/235 (75%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 93110 AAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGT 93169 |||||| | |||| || |||| ||||||||||||||| || || || | || ||| || Sbjct 138920 AAACCT-CATCTCTAGAAATCAGCTCATTGCTGAATGTCAATCCAGGCATCAATCCGCGC 138862 Query 93170 TTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCA 93229 ||||| | |||||| ||||| |||||||| ||||| || ||||| ||||| || || ||| Sbjct 138861 TTCTTCATCCAAAAGATTGATGCAAAACTGCCAGAGAAGAATATGCCTTCAACTGCAGCA 138802 Query 93230 AATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAA 93289 || || | ||||| || ||||| | || || || ||| ||||| || | ||||| Sbjct 138801 AAGGCAATGATACGCTCAGCAAATGTGGCTGACTTGCTGGCAATCCACTTCAGGGCCCAG 138742 Query 93290 TCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTC 93344 || || || ||||| | ||| || || ||||| ||||| || || ||| | |||| Sbjct 138741 TCAGCCTTCTTCTTCACACAGGGCAGGGTTTCAATAGCATTGAACAGGAAGTCTC 138687 Score = 150 bits (166), Expect = 2e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 93356 TCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCA 93415 |||| |||||||| || || | || ||| ||||| ||||| || ||||||||||| ||| Sbjct 138482 TCTCTAATGTATGTGTCAATGAGCAAAGAGTACATCTCAGAGTGAACATTCTCCATAGCA 138423 Query 93416 ATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCT 93475 || |||||||| ||||| ||||| ||||| || | ||||| |||||||| || | || Sbjct 138422 ATCTGGAATCCATAGAAGCATCTGGCTTCAGTCACTTGCACCTCTTGAGAGAAGCGTTCC 138363 Query 93476 ACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATA 93535 || | || ||||| || || ||||| || || ||||| ||||||| | ||| || || Sbjct 138362 ACTAAGTTCTCATTAACAATGCCATCAGACGCAGCAAAGAAAGCCAGCACATGTTTGATG 138303 Query 93536 AAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGA 93573 || ||| ||||| || || || || ||||| || || Sbjct 138302 AAGTGTCTCTCACTGTCCTTGAGATTCTCCCAGTCTGA 138265 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 || || ||||||||||| || || ||||| ||||| || ||||| || |||||||| ||| Sbjct 137855 TTGGATAGATCGACTTCCTCAACGGTCCAGAACGAAGCCTCTGCCTTCTTGTACATTTCC 137796 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700 || || || |||| || ||||| ||||| ||||| || |||||| ||| || | Sbjct 137795 CAGATATCAGGATACTGTATTGGGAATATAACAAAGCGGCGAGGGTTGTCTCGCAGAAGG 137736 Query 93701 GGCTCTAGTTGTGGGTCAAAC 93721 |||||| ||||||||||||| Sbjct 137735 GGCTCTTTTTGTGGGTCAAAC 137715 Score = 84.2 bits (92), Expect = 2e-11 Identities = 113/153 (74%), Gaps = 7/153 (5%) Strand=Plus/Minus Query 92743 TAGAAATCTGCATCTAGTGTAAATACATTGTCAAG-TGGATTCTTATTCATAACACCACA 92801 || || || || || ||||| ||||||||||| | ||| || |||||| || || Sbjct 140283 TAAAATTCAGCGTCAAGTGTGAATACATTGTCCATCTGG----TTGGCCATAACTCCCCA 140228 Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861 || ||||| || | |||||| || |||||||| || ||||| || ||||||||||| Sbjct 140227 CTTCTGGTACTCGCTAACTTTCTTCTCAAAGAAGTTGGTCTTACCCTCCAAAGATATAAG 140168 Query 92862 ATTCA-CTAGT-GATTGGATTCTTGGCGTTATA 92892 ||||| ||| | ||||||||||| ||| || Sbjct 140167 ATTCATGAAGTCAAATGGATTCTTGGTGTTGTA 140135 >seq344 Length=232072 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 200309 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 200368 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 200369 GTGGGTTCGAACCCCACACCTGACAAA 200395 >seq132 Length=695062 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 337973 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 338032 Query 126324 TGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||||||||||||||| Sbjct 338033 TGGGTTCGAACCCCACACCTGACAAAT 338059 >seq53 Length=1403349 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 711882 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 711941 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 711942 GTGGGTTCGAACCCCACACCTGACAAA 711968 >seq8 Length=3096529 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 2707750 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 2707691 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 2707690 GTGGGTTCGAACCCCACACCTGACAAA 2707664 >seq51 Length=1443499 Score = 129 bits (142), Expect = 7e-25 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 978250 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 978191 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 978190 GTGGGTTCGAACCCCACACCTGACA 978166 Score = 129 bits (142), Expect = 7e-25 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 1043020 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 1042961 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 1042960 GTGGGTTCGAACCCCACACCTGACA 1042936 Score = 123 bits (136), Expect = 3e-23 Identities = 77/83 (93%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct 1051373 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATAGGGCGT 1051314 Query 126325 GGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||| Sbjct 1051313 GGGTTCGAACCCCACACCTGACA 1051291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556853860122280