Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq434 185 6e-42 seq12 96.9 2e-15 >seq434 Length=190249 Score = 185 bits (204), Expect = 6e-42 Identities = 573/879 (65%), Gaps = 11/879 (1%) Strand=Plus/Plus Query 83856 CCGGTCCAACCGCGGCCGTACATGGCAACGCCAATAATTATTTTGTTGGGATCAACACCC 83915 || |||||||| ||||||||||| ||||| |||| | || || || ||| || ||| Sbjct 113948 CCAGTCCAACCACGGCCGTACATAGCAACACCAACGACGATCTTCTTAGGACTGACTCCC 114007 Query 83916 TGTTTAAGTAGCACACTGACAGCGTGATGTGTGGTGTATAACTCTTCCGAGTTCCAACTC 83975 || | || | ||||| || | || ||||| ||| | | |||||| Sbjct 114008 TGAGCCAACAGGAATTTGACACCGAAGTCAGTTGTGTAAGTCTCCTTGGGGTTCCATGCG 114067 Query 83976 GGCGCGTAAATTGTGGTTTGGTAGCCCAAATCCGTGTTTGACCAAGCACCTTTAAAATCA 84035 || |||| | | | ||||| ||| | | |||||||||||| || || || ||| Sbjct 114068 GGAGCGTGCAGAGCAGCTTGGTGGCCAAGAGTGTCGTTTGACCAAGCTCCCTTGAAGTCA 114127 Query 84036 TAATTCATTAAAAATATTTTTCCTAAAGACTTTTGCGCCTCGTCATAGTTTACCACGGCA 84095 || |||| || || || | | | ||| ||| ||| | | |||| |||||| | Sbjct 114128 TAGCTCATCAAGAAGATGTGATCCATGTACTGTTGAGCCGCCTTGTAGTCTACCACCTGA 114187 Query 84096 ATCTTGTCGTAACCCGCACTAATAGCGCTTGTTAATTCGTAAACCCTGCCAGT-TTGCGA 84154 |||||||| |||| | || || || || | |||||| | |||| || ||| | Sbjct 114188 ATCTTGTCCCAACCAGAGCTGATGGCTGAAGTCAGTTCGTATTTCTTGCCTGTCTTGGCA 114247 Query 84155 TTCTAGCTCGTCTAACATTGCGCGCAGTTCCTCTAATATTAAAATGTATGTTTTGGCGTC 84214 | ||||||| | ||| | | |||||||| | | | ||| | | |||| Sbjct 114248 GAC-AGCTCGTTGAGCATCTCTCTCAGTTCCTTCATCAGCTCGACGTAGATGTGACCGTC 114306 Query 84215 ACGTTCAGCATCCCCCAACGACGGGTTGGCTCCTTTGCCTCCCGGAAATTCCCAATCGAT 84274 |||| || | ||||| || || || || || || || ||||| ||||| Sbjct 114307 G---TCAGGGCTACCGAGATCAGGGTTAGCGCCCTTACCACCAGGGAACTCCCAGTCGAT 114363 Query 84275 GTCTACACCGTCGAAAAATTTCCATACTTGTAAAAACTCCTTAACCGAATTTACAAAAAC 84334 ||| || |||||||| |||||||| || | || |||||||| || | || || | Sbjct 114364 GTCCACTCCGTCGAAGAATTTCCAGGTTTCAAGGAAGTCCTTAACAGAGTCGACGAAG-C 114422 Query 84335 GTTTCTTTTTTCAACATTGTGCATGAA--ATAA-AACGGGTCCGACAACGTCCATCCTCC 84391 | ||| | || ||| |||| |||| | || || || || | ||| ||||| || || Sbjct 114423 GCTTCCTCTT--AACCTTGTCAGTGAAGAAGAAGAATGGATCAGCCAAGGTCCAGCCACC 114480 Query 84392 TATGGACGGAAGAATCTTTAGGTGCGGGTTCGCCAATTTAGCTGCCATCAATTGTCCAAA 84451 | ||| || | ||||| |||| || | ||| ||| ||||| || || || Sbjct 114481 AACGGAAGGTAAGATCTTCAGGTCAGGTCTTGCCTGTTTCAACATCATCAGCTGGCCGAA 114540 Query 84452 ATTGCCTTTATACGGTTCGTTCCAAGCGGACACGCCCTTTTGGGGCTTTTGTACGGCGGC 84511 || || || || ||||| ||||| | | || |||||||| || || || | || || Sbjct 114541 GTTACCCTTGTAGGGTTCATTCCAGGACGCCAAACCCTTTTGTGGTTTCTGAAGAGCTGC 114600 Query 84512 CCACGGATCGTGGATGGCAATTTTAAAATCCGCACGTCCCCTGCACGATCGTTGCAGAGA 84571 ||| || |||||||| | | ||| || || | | || ||||| ||||||||||||| Sbjct 114601 CCAAGGGTCGTGGATCGATACTTTGAAGTCTTCCCTGCCGCTGCAGGATCGTTGCAGAGC 114660 Query 84572 TTCGAAACTACCGGGTATCACTTTGAGAGCATCGTTTATTCCATTACCGCCGCAAATGGG 84631 || |||||| || || |||| | | ||||| || |||| || ||||| || || Sbjct 114661 TTGGAAACTGCCTTCGATTTCTTTCAAACTGTCGTTGATGCCATCTCCACCGCAGATTGG 114720 Query 84632 TATGAAACCGTACAACAAGTGTGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAATT 84691 ||||||||||||| | || | | ||| || | ||| || ||| ||||| || || Sbjct 114721 GATGAAACCGTACAGAAGATGGGTAAGATTCGGGATGGGTACGCGGTCGACGGGGAACTT 114780 Query 84692 GCGCCCGTACACTCCCCATTCAACAAAATACGCAGCAAC 84730 | ||| || |||||||| || || || || |||| Sbjct 114781 CCTGGGGTAGACGCCCCATTCGACGAAGTAAGCGCCAAC 114819 >seq12 Length=2918994 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| ||||| || ||| | || || || ||||| |||||||| || | || |||| | Sbjct 2853153 CAACATGCAGATCTTTGTGAAGACTTTGACGGGGAAAACCATAACATTAGAGGTGGAACC 2853094 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | | || || | | | |||| ||||||| ||||| || || | ||| | Sbjct 2853093 CTCTGATACCATTGAAAACGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCTCCCGA 2853034 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||||||||| | ||||| || || |||||| | |||||| | ||| | |||| || Sbjct 2853033 TCAACAGAGATTGATCTTCGCCGGAAAACAATTGGAAGATGGACGCACTCTTTCCGACTA 2852974 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||| |||||||| |||||||||||| | || | ||| | |||| || Sbjct 2852973 CAATATCCAGAAGGAGTCTACTCTTCATCTCGTGCTGCGTCTCAGAGGTGG 2852923 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | ||||| || || ||||| || || || | ||| || || | Sbjct 2852465 ATGCAAATCTTCGTCAAAACTTTGACTGGCAAGACTATCACACTAGAAGTTGAGCCCTCT 2852406 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || || || ||| | ||| | |||| Sbjct 2852405 GACACAATTGAAAATGTCAAAGCTAAAATTCAGGACAAGGAAGGTATTCCTCCAGACCAG 2852346 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| || | ||||| || ||||| ||| | |||||| ||| || | ||||||||| Sbjct 2852345 CAGCGATTGATCTTCGCCGGCAAGCAATTGGAAGATGGGCGAACCTTGTCTGATTACAAT 2852286 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||||||||| |||||||| ||||| | ||| |||| || || Sbjct 2852285 ATTCAGAAGGAATCCACTCTTCACTTGGTACTTCGTCTACGTGGTGG 2852239 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| ||||| || ||||||||||| | ||| ||| || | Sbjct 2849971 ATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACATTAGAAGTTGAACCCTCT 2849912 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | || |||||| ||||| ||||| | || | | ||| Sbjct 2849911 GACACAATTGAAAACGTGAAAGCCAAAATTCAAGATAAGGAGGGAATTCCACCAGATCAA 2849852 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||| | || || |||||||| || || ||||| ||| | ||||||||||| Sbjct 2849851 CAAAGATTGATTTTCGCTGGCAAGCAGCTTGAAGACGGGCGCACTCTTTCCGATTACAAT 2849792 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 ||||| |||||||| || |||||| | || || | || |||| ||| Sbjct 2849791 ATTCAAAAGGAATCAACACTTCATTTAGTTCTAAGGTTGAGAGGTGGA 2849744 Score = 86.0 bits (94), Expect = 4e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||| ||| | ||||||||||| ||||| || || |||||| | ||| | | |||| Sbjct 2424773 ACCAGCAGCGTCTTATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTTTCTGATT 2424832 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||| ||||| |||||||| ||||| |||| || ||| | ||||| || Sbjct 2424833 ACAATATCCAGAAAGAATCTACCCTTCACTTGGTCTTGCGTCTGCGAGGTGG 2424884 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | || || || || ||||| || ||||| |||| || | | Sbjct 2850199 ATGCAAATCTTCGTCAAGACTTTGACCGGCAAGACTATTACATTGGAGGTCGAGCCTTCG 2850140 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | || | || |||||| || |||||||| | || | ||||| Sbjct 2850139 GACACGATCGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCACCAGACCAA 2850080 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | ||||| || ||||| ||| | || ||| | ||| || | ||||||||| Sbjct 2850079 CAGAGATTGATCTTCGCCGGCAAGCAATTGGAGGATGGACGAACATTGTCTGATTACAAT 2850020 Query 22014 ATTCAGAAGGAATCTAC 22030 ||||||||||||||||| Sbjct 2850019 ATTCAGAAGGAATCTAC 2850003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358120448447938