Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq33 118 1e-21 >seq33 Length=1899332 Score = 118 bits (130), Expect = 1e-21 Identities = 474/734 (65%), Gaps = 33/734 (4%) Strand=Plus/Minus Query 113933 CGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 113992 |||||| |||| || |||| || |||| ||||| | ||||| || ||||| ||||| Sbjct 686565 CGTCTCTGATAAATGTTGGAAGTAAATGGTTCAAATGATTCATTATTTCCCAATATTTGA 686506 Query 113993 GCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTA 114052 || ||||| || || ||||| || || | | ||| || | ||||| | || | Sbjct 686505 GCAGTGGATGCAGTTGGCATTGGAGCTAATAATAGGGAATTTCTAAGACCATGTTTGGCA 686446 Query 114053 ATGCGTTCCTTGAGGGCGTCCCAGTCGTA---GT---TGAGCTTTGTCTCCCCCTGCCAC 114106 || ||| ||||| | |||| | | || || | || | | || || Sbjct 686445 ATTTTTTCTTTGAGTGACACCCAATTCCACAAGTCTGTGGGGGTTTTATTCC------AC 686392 Query 114107 ATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCC 114166 |||||| | || | |||||||| ||| || | || ||| | ||||| || ||| Sbjct 686391 ATATCATATTGCAATATACCTTGACTGGCAGGACAGCCTTCATAAGTCTCATAGACGCCA 686332 Query 114167 TCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATG 114226 | ||| || || || | || || || || || | | ||| ||||| ||||| || Sbjct 686331 TACTTCTCAGCTAACTCACAACTGGCTTCTAGTGCCCCATAATAAATTGTTTCAAATATT 686272 Query 114227 CGAGCATTCA-TTGCCTTG--GCCTCG---TCGGAATCAA-ACGCGAGTCGGCACAAAAT 114279 | ||| | || ||| ||||| ||| || | |||| | | |||| Sbjct 686271 TGTTGATTTAATTTAATTGCTGCCTCACTTTCGTAAGGTATACGC-ATT------AAAAC 686219 Query 114280 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 114339 |||| |||| || | |||||||| || | || || || || || |||||||| || || Sbjct 686218 AAATGCATCAGCTAATCCTTGGACTCCAATTCCGATGGGTCGGTGCCTCATATTTGAGTT 686159 Query 114340 TCGAGCGGTCTC-CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 114398 | || ||| ||| |||||| |||| ||| |||| |||||||||| | || | Sbjct 686158 TTTTGCC-TCTGGCACTGGATAATAATTTACATCAATAATTTTATTTAGATTCTGAGTTA 686100 Query 114399 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT 114458 | ||| || | ||| | | || | ||| | | | | || ||||| ||| Sbjct 686099 TAGTCTTAGTAACTTCCTTTAATTTGGTGAAATTATATGTTT---TGTCCTCATTCACAA 686043 Query 114459 ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG-TGTAC 114517 || || | || ||||| || ||||| ||||||| ||||| | || || |||| Sbjct 686042 ACATATTTAAAGCAATTGATGCTAGATTGCACACAGCCACTTCATC-TGATGAGGTGTAT 685984 Query 114518 TCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 114577 |||| |||||| || ||||| || | ||||| || |||||||||||||| || Sbjct 685983 TCTACAATTTCAGTGCACAAGTTGCTGCATTTAATAGTACCCAAGTTCTTTTGGTTGCTT 685924 Query 114578 TTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTG 114637 ||| | || || | ||| || |||||||||||||| || || || || ||| | | | Sbjct 685923 TTTCTATTGCATGAATCTTTATAAAGCATGTATGGAGTTCCTGTTTCAACTTGTGCTTCG 685864 Query 114638 AGAATAGCCTTCCA 114651 | |||||| ||||| Sbjct 685863 ATAATAGCTTTCCA 685850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597346155480760