Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22]
997 sequences; 337,072,206 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq434 277 2e-69
seq12 145 8e-30
seq33 138 1e-27
>seq434
Length=190249
Score = 277 bits (306), Expect = 2e-69
Identities = 653/975 (67%), Gaps = 21/975 (2%)
Strand=Plus/Minus
Query 27464 GTCGTCGCCGCGTACTTTGTCGAATGGGGTGTGTACGGCCGTAATTTTGCCGCGGACCGC 27523
|| || | ||| ||||| ||||||||||| || ||| | | || || ||| ||||||
Sbjct 114822 GTTGTTGGCGCTTACTTCGTCGAATGGGGCGTCTACCCCAGGAAGTTCCCCGTCGACCGC 114763
Query 27524 GTACCGGCGCCCAACCTGTCACATTTACTATACGGGTTCGTGCCGATATGCGGCGGCGAC 27583
||||| || || || | ||| | || ||||| ||| | || || ||||| || ||
Sbjct 114762 GTACCCATCCCGAATCTTACCCATCTTCTGTACGGTTTCATCCCAATCTGCGGTGGAGAT 114703
Query 27584 GGCATCAACGACAGCCTTAAAACTATTCCGGGTAGTTTCGAAGCGTTGCAAAAGTCGTGC 27643
|||||||||||||| | ||| || || |||||| |||| ||||| || |||
Sbjct 114702 GGCATCAACGACAGTTTGAAAGAAATCGAAGGCAGTTTCCAAGCTCTGCAACGATCCTGC 114643
Query 27644 GCGGGTCGTGAAAACTTTAAAGTGGCCATTCACGATCCGTGGGCTGCATTGCAAAAACCA 27703
|| | ||| |||| ||||| | || ||||| || ||||| || | || ||||||
Sbjct 114642 AGCGGCAGGGAAGACTTCAAAGTATCGATCCACGACCCTTGGGCAGCTCTTCAGAAACCA 114583
Query 27704 CAAAAAGGCGTTTCGGCTTGGACGGAACAATACAAAGGTAATTTTGGACAGTTAATGGCG 27763
||||| || | || | |||| |||| ||||| ||||| || || ||| | ||| |
Sbjct 114582 CAAAAGGGTTTGGCGTCCTGGAATGAACCCTACAAGGGTAACTTCGGCCAGCTGATGATG 114523
Query 27764 ATAAAGCGTGCAAACCCGCATTTAAAAATTCTACCGTCCATAGGAGGGTGGACGCTGTCG 27823
| || | |||| || | | || || |||| ||| | || || ||||| || |
Sbjct 114522 TTGAAACAGGCAAGACCTGACCTGAAGATCTTACCTTCCGTTGGTGGCTGGACCTTGGCT 114463
Query 27824 GATCCATTTTACTTTTTTCAC-GACGCTGGCAA----ACGCGCCACATTCGTCGAATCGG 27878
|||||||| | | || ||||| ||| | || | |||| |||||||| || |
Sbjct 114462 GATCCATTCTTC-TTCTTCACTGACAAGGTTAAGAGGAAGCGC----TTCGTCGACTCTG 114408
Query 27879 TTCGCGAATTTCTGCAAACTTGGAAATTTTTCGACGGCGTGGACATCGATTGGGAATTTC 27938
|| || || || |||| |||||||| |||||||| ||||||||||| ||||| || |
Sbjct 114407 TTAAGGACTTCCTTGAAACCTGGAAATTCTTCGACGGAGTGGACATCGACTGGGAGTTCC 114348
Query 27939 CTGGCGGTAACGGCGCAAACCCACTGTTAGGCGATCCCCAACGAGACGGTTTAGTGTATG 27998
|||| ||||| ||||| ||||| | || | ||| || |||||| | || |
Sbjct 114347 CTGGTGGTAAGGGCGCTAACCCTGATCTCGG-TAGCCCTGAC--GACGGTCACATCTACG 114291
Query 27999 TGGTGTTGTTGCGCGAACTTCGCGATATGCTCGATCAACTCGAACACCACACGGGCCGGC 28058
| | | || || ||||| | || |||||| | | || | | || ||| |
Sbjct 114290 TCGAGCTGATGAAGGAACTGAGAGAGATGCTCAACGAGCTGTCTGCCAAGACAGGCAAGA 114231
Query 28059 AATACGAACTGACAAGTGCAATCGGCGCTGGCTACGACAAAATTGAGGTAGTTGATTACA 28118
||||||||||||| || ||| || |||| | ||||| ||| |||| || || ||||
Sbjct 114230 AATACGAACTGACTTCAGCCATCAGCTCTGGTTGGGACAAGATTCAGGTGGTAGACTACA 114171
Query 28119 ACGAAGCGCAATCGTATTTGGACAAAATCTTTTTAATGAGTTATGATTTTAAAGGCGCTT 28178
| | || ||| ||| |||| | ||||| || ||||| ||||| || || || ||||
Sbjct 114170 AGGCGGCTCAACAGTACATGGATCACATCTTCTTGATGAGCTATGACTTCAAGGGAGCTT 114111
Query 28179 GGTCCAACTCGGATTTGGGCCATCAAACCGCTTTGTATGCGCCCGATTGGAAACCCGACG 28238
|||| ||| | | ||||| ||| | ||| || | || |||| ||||| ||| | |
Sbjct 114110 GGTCAAACGACACTCTTGGCCACCAAGCTGCTCTGCACGCTCCCGCATGGAACCCCAAGG 114051
Query 28239 AGCGGTATACGACCGATTTTGCGGTGCGCTCGTTGCTTCT---TCAAAAAGTACGTTCCG 28295
|| || || || || || ||||| | || || | ||| ||| || |
Sbjct 114050 AGACTTACACAACTGACTT--CGGTG-TCAAATTCCTGTTGGCTCAGGGAGTCAGTCCTA 113994
Query 28296 AAAAAATCGTGATCGGTGTGGCAATGTACGGTCGCGGTTGGAGTGGCGT-ATCGGAATAT 28354
| || ||||| | ||||| || |||||||| || ||||||| ||| || | ||| ||
Sbjct 113993 AGAAGATCGTCGTTGGTGTTGCTATGTACGGCCGTGGTTGGACTGGAGTCAACGG-TTAC 113935
Query 28355 TTAAACGATAATCCCTTTACCGGCATCGCCACAGGCCCGGTGCCCGGCACTTGGGAAGAC 28414
| ||| |||||| || || || | || || ||||| || || || ||| | ||
Sbjct 113934 AAAGACGGTAATCCATTCACTGGTGTAGCTACTGGCCCAGTCAAGGGTACCTGGCAGGAT 113875
Query 28415 GGCGTCGTAGATTAC 28429
|| || || || |||
Sbjct 113874 GGTGTAGTGGACTAC 113860
>seq12
Length=2918994
Score = 145 bits (160), Expect = 8e-30
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||||||||| ||||||||||| | | |||||| | ||||||||||||
Sbjct 2423720 TGAAGGGTAGATTCTTTTTGGATGTTGTAATCAGAAAGGGTGCGTCCATCTTCAAGCTGC 2423661
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
||||||||| | || || ||||||||||| || |||||||| || || || || || ||
Sbjct 2423660 TTGCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTG 2423601
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||||||| ||| | || ||| | || ||||| | ||| | ||| || || |||
Sbjct 2423600 GCCTTTACATTCTCAATAGTGTCAGAAGGCTCAACTTCAAGAGTGATGGTTTTTCCAGTC 2423541
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
|| || || |||||||| |||||
Sbjct 2423540 AATGTCTTCACGAAAATCTGCAT 2423518
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || | ||| || || |||| ||||| || ||||| |||||||| |||||||| |
Sbjct 2849745 CCACCTCTCAACCTTAGAACTAAATGAAGTGTTGATTCCTTTTGAATATTGTAATCGGAA 2849804
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| |||||| ||||||||||||||||||| || |||| | | || || || || |||
Sbjct 2849805 AGAGTGCGCCCGTCTTCAAGCTGCTTGCCAGCGAAAATCAATCTTTGTTGATCTGGTGGA 2849864
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||| || || ||||| | |||| ||||| || || | ||| ||| || || ||
Sbjct 2849865 ATTCCCTCCTTATCTTG-AATTTTGGCTTTCACGTTTTCAATTGTGTCAGAGGGTTCAAC 2849923
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | ||| || || || |||||||| || |||||||||||
Sbjct 2849924 TTCTAATGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCAT 2849971
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || || |||| || ||||| |||||||||||||| || |
Sbjct 2423517 ACCACCTCGCAGACGCAGGACCAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGA 2423458
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||||| | ||||| ||||||||||||||| | || | || |||||||| || ||
Sbjct 2423457 GAGGGTGCGCCCATCTTCCAGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCTGGTGG 2423398
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| |||||||| ||||| ||||| ||| ||| ||| | ||||| | || ||
Sbjct 2423397 GATACCTTCTTTGTCTTGAATTTTAGCCTTAACATTCTCGATAGTATCTGAAGGCTCGAC 2423338
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | || | ||||| || || | ||||| |||||||| |||||
Sbjct 2423337 TTCGAGGGTAATTGTCTTACCAGTAAGCGTTTTAACGAAAATCTGCAT 2423290
Score = 136 bits (150), Expect = 4e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | ||| |||| || | || ||||| |||||||| |||||||| |
Sbjct 2850200 ACCACCGCGCAGACGAAGTACTAAGTGTAGAGTGGATTCCTTTTGAATATTGTAATCGGA 2850259
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| ||||||| ||||| |||||||| | || | |||||||| || || ||
Sbjct 2850260 AAGTGTGCGACCGTCTTCCAGCTGTTTGCCGGCGAAGATCAATCGCTGCTGATCTGGTGG 2850319
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACT-GTATCACCGGCGTCCA 64394
||| ||||| || || || ||||| |||||| | | || | || || || || |
Sbjct 2850320 AATACCTTCCTTGTCCTGGATTTTG-GCTTTAACATTTTCAATAGTGTCGGAGGGTTCAA 2850378
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||| || | |||||||||||||| ||||| ||||| ||||||||
Sbjct 2850379 CTTCTAGGGTGATAGTCTTGCCGGTCAAGGTTTTGACGAAGATTTGCAT 2850427
Score = 136 bits (150), Expect = 4e-27
Identities = 154/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||| || ||||| |||||||| | | ||| ||| | ||||| | |||
Sbjct 2852263 TGAAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAGGTTCGCCCATCTTCCAATTGC 2852322
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|||||||| | || | ||||||||||| |||||||| ||||| || || || | ||||
Sbjct 2852323 TTGCCGGCGAAGATCAATCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTG-AATTTT 2852381
Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419
||||| ||| || | ||| ||| || || ||||||| || | |||||||| ||
Sbjct 2852382 AGCTTTGACATTTTCAATTGTGTCAGAGGGCTCAACTTCTAGTGTGATAGTCTTGCCAGT 2852441
Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443
||||||||| ||||| ||||||||
Sbjct 2852442 CAAAGTTTTGACGAAGATTTGCAT 2852465
Score = 132 bits (146), Expect = 5e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || |||||||| || || |||||||| | | ||| || | ||||||||||||
Sbjct 2424860 TGAAGGGTAGATTCTTTCTGGATATTGTAATCAGAAAGGGTTCGTCCATCTTCAAGCTGC 2424801
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
||||||||| | || || ||||||||||| || ||||||||||| || || || || ||
Sbjct 2424800 TTGCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTG 2424741
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| || || | |||||| | || ||||||| || | ||| || || |||
Sbjct 2424740 GCCTTAACGTTTTCGATGGTATCAGAAGGCTCAACTTCTAGGGTGATGGTTTTTCCAGTC 2424681
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
|| || ||||||||||| |||||
Sbjct 2424680 AAGGTCTTTACGAAAATCTGCAT 2424658
Score = 132 bits (146), Expect = 5e-26
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|||| ||| | || || || || || |||||||| || | | ||||| ||||||||
Sbjct 2852029 ACTAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGACCGTCTTCA 2852088
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|||||||||||||| | || | ||||||||||| || |||||||||||||| |||||
Sbjct 2852089 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGG 2852148
Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413
| |||| ||||| ||| || | ||| || | || || |||| ||| | ||| ||
Sbjct 2852149 A-TTTTGGCTTTAACATTTTCGATTGTGTCTGAAGGCTCAACCTCTAGAGTGATGGTTTT 2852207
Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| ||||| || || ||||| ||||||||
Sbjct 2852208 GCCTGTCAAGGTCTTGACGAAGATTTGCAT 2852237
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || |||||||| || ||||||||||| | | || ||| | ||||||||||||
Sbjct 2425088 TGAAGGGTAGATTCTTTCTGGATGTTGTAATCAGAAAGAGTACGCCCATCTTCAAGCTGC 2425029
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|||||||| | || || ||||||||||| || ||||||||||| || || || || ||
Sbjct 2425028 TTGCCGGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCTTCCTTGTCCTGGATCTTG 2424969
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| || | |||||| | || ||||||| || | || || || |||
Sbjct 2424968 GCCTTAACATTTTCAATGGTATCAGAAGGCTCAACTTCTAGGGTGATAGTTTTTCCAGTC 2424909
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
|| || || |||||||| |||||
Sbjct 2424908 AAGGTCTTCACGAAAATCTGCAT 2424886
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||| || |||||||| || || | | ||||| | ||||||||||||
Sbjct 2425316 TGAAGGGTAGATTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGTCCATCTTCAAGCTGC 2425257
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|||||||| | || || ||||||||||| || ||||||||||| || ||||| || ||
Sbjct 2425256 TTGCCGGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCTTCCTTGTCTTGGATCTTG 2425197
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||||||| ||| | || ||| | || || || | ||| | ||| || || |||
Sbjct 2425196 GCCTTTACATTCTCAATAGTGTCAGAAGGTTCTACCTCCAGAGTGATGGTTTTTCCAGTC 2425137
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
|| || || |||||||| |||||
Sbjct 2425136 AATGTCTTCACGAAAATCTGCAT 2425114
Score = 125 bits (138), Expect = 7e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| ||||| ||||||||||| || | | |||||| | |||||||||||||||||
Sbjct 2424398 GTCGACTCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTCAAGCTGCTTGCCA 2424339
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || || ||||||||||| || ||||||||||| || ||||| || || |||
Sbjct 2424338 GCGAAGATAAGACGCTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTA 2424279
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | |||||| | || ||||| | || | || || || ||||| ||
Sbjct 2424278 ACATTTTCGATGGTATCAGAAGGCTCAACTTCGAGGGTGATAGTTTTTCCAGTCAAGGTC 2424219
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||||||| |||||
Sbjct 2424218 TTCACGAAAATCTGCAT 2424202
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| |||||||| | | |||| |||| || ||||||||||| || ||||| ||||
Sbjct 2852695 CCTCCGCGCAAACGCAATACTAAGTGAAGGGTAGATTCTTTTTGGATATTGTAGTCTGAT 2852754
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| | ||||| | ||| ||||||||| | || | || ||||| || || ||
Sbjct 2852755 AATGTGCGTCCATCTTCCAACTGTTTGCCGGCAAAGATCAATCGTTGCTGATCAGGTGGG 2852814
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || | |||| ||||| ||| || | ||| ||| | || ||
Sbjct 2852815 ATACCCTCCTTATCCTGGA-TTTTGGCTTTAACATTTTCGATTGTGTCAGAAGGCTCAAC 2852873
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| ||| | ||| ||||| ||||| ||||||||||||||||||||
Sbjct 2852874 CTCTAAAGTGATGGTTTTGCCAGTCAATGTTTTTACGAAAATTTGCAT 2852921
Score = 123 bits (136), Expect = 2e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||| || |||||||| || || | | ||| ||| | ||||||||||||
Sbjct 2425544 TGAAGGGTAGATTCCTTCTGAATGTTATAGTCAGAAAGGGTACGCCCATCTTCAAGCTGC 2425485
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
||||| ||| | || || ||||||||||| || |||||||| || || || || || ||
Sbjct 2425484 TTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGGATCTTG 2425425
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||||||| ||| | || ||| | |||||||| | ||| | || || || ||
Sbjct 2425424 GCCTTTACATTCTCAATAGTGTCAGAAGGCTCCACTTCAAGAGTGATAGTTTTACCAGTG 2425365
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
| || || ||||||||||||||
Sbjct 2425364 AGGGTCTTCACGAAAATTTGCAT 2425342
Score = 123 bits (136), Expect = 2e-23
Identities = 169/231 (73%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||| || | || | ||||| || || || || || ||||| |
Sbjct 2852466 ACCACCACGCAGACGAAGGACCAAGTGGAGAGTCGACTCCTTCTGGATATTATAATCAGA 2852525
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | || || | ||| ||||| || | || || ||||||||||| || ||
Sbjct 2852526 AAGAGTGCGGCCATCCTCTAACTGTTTGCCTGCGAAGATCAGTCGCTGCTGGTCTGGGGG 2852585
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCA-CCGGCGTCC 64393
||| ||||| || || |||| |||| ||||| ||| || | ||| ||| |||| ||
Sbjct 2852586 AATACCTTCCTTATCCTGTA-TTTTGGCTTTGACATTTTCAATTGTGTCAGACGGC-TCA 2852643
Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||||||| ||||| || ||||| || |||||||||||||| |||||||||
Sbjct 2852644 ACTTCTAAAGTTATTGTTTTGCCAGTTAAAGTTTTTACGAATATTTGCATT 2852694
Score = 122 bits (134), Expect = 9e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| ||||||||||| || | | ||| ||| | ||||||||||||||||||
Sbjct 2423942 GTTGACTCTTTCTGAATGTTGTAGTCAGAAAGGGTACGCCCATCTTCAAGCTGCTTGCCG 2423883
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || || ||||||||||| || ||||||||||| || ||||| ||||| ||||
Sbjct 2423882 GCGAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATTTTAGCCTTT 2423823
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | ||||| | |||||||| | || | || || || || | ||
Sbjct 2423822 ACGTTTTCAATGGTATCGGAAGGCTCCACTTCAAGGGTGATAGTTTTACCAGTGAGGGTC 2423763
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||||||| |||||
Sbjct 2423762 TTCACGAAAATCTGCAT 2423746
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || ||||| | | || | ||| | || || ||||| ||||||||||| || |
Sbjct 2424201 ACCACCTCGCAAACGCAAAACCAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGA 2424142
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | ||||| |||||||||||||| | || || ||||||||||| || ||
Sbjct 2424141 AAGAGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCTGGGGG 2424082
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||||| || || || || || || ||| ||| || | |||||| | || ||
Sbjct 2424081 AATTCCCTCCTTGTCCTGGATCTTGGCCTTAACATTTTCGATAGTATCAGAAGGCTCAAC 2424022
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | ||| || || ||||| || || |||||||| |||||
Sbjct 2424021 TTCTAGGGTGATGGTTTTTCCAGTCAATGTCTTCACGAAAATCTGCAT 2423974
Score = 116 bits (128), Expect = 4e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || || | ||| ||||||||||| |||||||| || | | ||||| |||||
Sbjct 2423273 AGAACAAGGTGGAGCGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTGCGACCGTCT 2423214
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | |||||| || || | || || |||||||| || || ||||| |||||||| |||
Sbjct 2423213 TCTAACTGCTTTCCAGCGAAGATCAGTCGCTGCTGATCTGGGGGAATGCCTTCTTTGTCT 2423154
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| ||||| |||||| || | || || | || ||||| | ||| | ||
Sbjct 2423153 TGAATTTTGGCTTTTACATTTTCAATAGTGTCGGATGGCTCAACTTCAAGAGTGATAGTT 2423094
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATA 64450
|| || ||||| ||||| || ||||| |||||| | |||
Sbjct 2423093 TTACCCGTCAAGGTTTTCACAAAAATCTGCATTATGATA 2423055
Score = 116 bits (128), Expect = 4e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| ||||||||||| || | | ||||| | ||||| |||||||||||
Sbjct 2424626 GTAGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGTCCATCTTCCAGCTGCTTGCCA 2424567
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || || ||||||||||| || |||||||| || || || || || || ||||
Sbjct 2424566 GCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTT 2424507
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| ||| | || ||| | || || || | ||| | ||| || || ||||| ||
Sbjct 2424506 ACATTCTCAATAGTGTCAGAAGGTTCTACCTCCAGAGTGATGGTTTTTCCAGTCAAGGTC 2424447
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||||||| |||||
Sbjct 2424446 TTCACGAAAATCTGCAT 2424430
Score = 116 bits (128), Expect = 4e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| ||||| || |||||||| || | | ||||| | ||||| |||||||||||
Sbjct 2425766 GTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCATCTTCCAGCTGCTTGCCA 2425707
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || || ||||||||||| || ||||||||||| || ||||| ||||| |||
Sbjct 2425706 GCGAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATTTTAGCCTTA 2425647
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | |||||| | || ||||| | || | ||||| || ||||| ||
Sbjct 2425646 ACGTTTTCGATGGTATCAGAAGGCTCGACTTCAAGGGTGATAGTCTTTCCAGTCAAGGTC 2425587
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||||||| |||||
Sbjct 2425586 TTCACGAAAATCTGCAT 2425570
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||||| || || || || || || ||||| || | | ||||| | |||
Sbjct 2852938 AGCACGAGATGAAGAGTAGACTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGTCCATCT 2852997
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | || || ||||| | || | | ||| || ||||||||||| ||||| || |||
Sbjct 2852998 TCCAATTGTTTTCCGGCGAAGATCAATCTCTGTTGATCGGGAGGAATGCCTTCCTTATCT 2853057
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | |||||||||| || || | |||||| || ||||| |||| |||| |||
Sbjct 2853058 TG-AATTTTTGCTTTAACGTTTTCAATGGTATCAGAGGGTTCCACCTCTAATGTTATGGT 2853116
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| || |||||||| || || || || ||||| ||
Sbjct 2853117 TTTCCCCGTCAAAGTCTTCACAAAGATCTGCATGTT 2853152
Score = 102 bits (112), Expect = 8e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| |||| ||| | ||| ||||| || ||||| |||||||| | | || || | ||
Sbjct 2849988 AGGACTAAATGCAACGTAGATTCCTTCTGAATATTGTAATCAGACAATGTTCGTCCATCC 2850047
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | ||||||||||| | || | | ||| ||||| || |||||||| ||||| |||
Sbjct 2850048 TCCAATTGCTTGCCGGCGAAGATCAATCTCTGTTGGTCTGGTGGAATTCCCTCTTTGTCT 2850107
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | |||| ||||| ||| || | || || | || || || | || | ||
Sbjct 2850108 TG-AATTTTGGCTTTGACATTTTCGATCGTGTCCGAAGGCTCGACCTCCAATGTAATAGT 2850166
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||||||||||||| || ||||| ||||||||
Sbjct 2850167 CTTGCCGGTCAAAGTCTTGACGAAGATTTGCAT 2850199
>seq33
Length=1899332
Score = 138 bits (152), Expect = 1e-27
Identities = 340/511 (67%), Gaps = 10/511 (2%)
Strand=Plus/Minus
Query 153998 TAAATCTTCAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCAC 154057
||||||| | ||| || || |||| ||||| || || || | ||| || || | |
Sbjct 686617 TAAATCTCGTAACAAATGATGATTAACAACTTGGAATTCACCTGACAAGACTCGTCTCTG 686558
Query 154058 ATACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGT 154117
||| | ||| || || || || || ||||| || || || ||||||||||| || |
Sbjct 686557 ATAAATGTTGGAAGTAAATGGTTCAAATGATTCATTATTTCCCAATATTTGAGCAGTGGA 686498
Query 154118 TGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAA 154177
||| || ||||| || | || | || |||| | ||| ||||| |||||
Sbjct 686497 TGCAGTTGGCATTGGAGCTAATAATAGGGAATTTCTAAGACCATGTTTGGCAATTTTTTC 686438
Query 154178 TTTTAAATCTGCCCAATTCCACAAGTTGGTAGG--TTGCACGTTCCACATGTCGTATTGC 154235
||| | ||||||||||||||| || || || | |||||||| || ||||||
Sbjct 686437 TTTGAGTGACACCCAATTCCACAAGTCTGTGGGGGTTTTA--TTCCACATATCATATTGC 686380
Query 154236 AAAACACCCAAACTCGCCGGACTGTCACTATAACT---AGAGTACGGCCCGTTCAGTTTT 154292
|| | ||| ||| || |||| | | |||| | | || ||| || | | |
Sbjct 686379 AATATACCTTGACTGGCAGGACAGCCTTCATAAGTCTCATAG-ACG--CCATACTTCTCA 686323
Query 154293 GCCAAGTCGCAACTGGCTTCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTT 154352
|| || || ||||||||||||| ||| |||| || | ||||| ||||||| |||
Sbjct 686322 GCTAACTCACAACTGGCTTCTAGTGCCCCATAATAAATTGTTTCAAATATTTGTTGATTT 686263
Query 154353 AACATTTTGGCTTTGTCACTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGC 154412
|| | | ||| ||||||||||| || | | || || | ||| ||||| || |
Sbjct 686262 AATTTAATTGCTGCCTCACTTTCGTAAGGTATACGCATTAAAACAAATGCATCAGCTAAT 686203
Query 154413 CCTTGAATGCCCACTCCAACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGA 154472
||||| | || | ||| | ||||| ||| | | ||| || | ||| || | ||
Sbjct 686202 CCTTGGACTCCAATTCCGATGGGTCGGTGCCTCATATTTGAGTTTTTTGCCTCTGGCACT 686143
Query 154473 GGATAATAATTGATATCGATAATTTTATTTA 154503
||||||||||| | ||| |||||||||||||
Sbjct 686142 GGATAATAATTTACATCAATAATTTTATTTA 686112
Score = 122 bits (134), Expect = 9e-23
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | || |||||||||| || | || ||||| || || |||||||| ||||
Sbjct 99896 ACCTCCTCTCAGCCTAAGCACTAAGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCTGA 99955
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| | ||||| | ||| || ||||| | || || || |||||||| || ||
Sbjct 99956 GAGTGTGCGGCCATCTTCCAACTGTTTACCGGCGAATATAAGACGTTGCTGGTCTGGCGG 100015
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || ||||| || || || ||| ||| ||| ||| | || || || |||||
Sbjct 100016 GATGCCCTCTTTGTCCTGAATCTTTGCCTTCACATTCTCAATAGTGTCTGAAGCCTCCAC 100075
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTA 64447
|| | || | |||||| || |||| ||||||||||| ||||||||| ||
Sbjct 100076 CTCGAGGGTGATGGTCTTACCCGTCAGGGTTTTTACGAAGATTTGCATTGTA 100127
Score = 113 bits (124), Expect = 5e-20
Identities = 147/202 (73%), Gaps = 1/202 (0%)
Strand=Plus/Plus
Query 64242 GAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCT 64301
|||| || ||||| || ||||||||||| | || || ||||| | ||||| | ||| |
Sbjct 106151 GAAT-GTGGATTCCTTCTGAATGTTGTAGTTTGTGAGTGTGCGGCCATCTTCCAACTGTT 106209
Query 64302 TGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTT 64361
| ||||| | || || || |||||||| || ||||| || ||||| || || || |||
Sbjct 106210 TACCGGCGAATATAAGACGTTGCTGGTCTGGCGGAATGCCCTCTTTGTCCTGAATCTTTG 106269
Query 64362 GCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCA 64421
||| ||| ||| | || || || ||||| || | || | |||||| || ||||
Sbjct 106270 CCTTCACATTCTCAATAGTCTCTGAAGCCTCCACCTCGAGGGTGATGGTCTTACCCGTCA 106329
Query 64422 AAGTTTTTACGAAAATTTGCAT 64443
||||||||||| ||||||||
Sbjct 106330 GGGTTTTTACGAAGATTTGCAT 106351
Score = 113 bits (124), Expect = 5e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | || || ||||| | |||| || ||||| ||||| ||||| || ||||
Sbjct 110891 ACCTCCTCTCAGCCTGAGCACCAAGTGAAGAGTGGATTCCTTTTGGATGTTATAGTCTGA 110832
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | ||||| | ||| || ||||| | || || || |||||||| || ||
Sbjct 110831 AAGAGTGCGGCCATCTTCCAACTGTTTACCGGCGAAGATAAGACGTTGCTGGTCTGGCGG 110772
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || ||||| || || |||||| ||| ||| ||| | || || || |||||
Sbjct 110771 GATGCCCTCTTTGTCCTGGATTTTTGCCTTCACATTCTCAATAGTGTCTGAAGCCTCCAC 110712
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTA 64447
|| | || | |||||| || |||| ||||||||||| || |||||| ||
Sbjct 110711 CTCGAGGGTGATGGTCTTACCCGTCAGGGTTTTTACGAAGATCTGCATTGTA 110660
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/203 (70%), Gaps = 4/203 (2%)
Strand=Plus/Plus
Query 64242 GAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCT 64301
|||| || ||||| || ||||||| ||| | || || ||||| | ||||| | ||| |
Sbjct 109215 GAAT-GTGGATTCCTTCTGAATGTGGTAGTTTGTGAGTGTGCGGCCATCTTCCAACTGTT 109273
Query 64302 TGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTT 64361
| ||||| | || || || |||||||| || || || | ||||| || || ||||||
Sbjct 109274 TACCGGCGAAGATAAGACGTTGCTGGTCTGGCGGGATGCTCTCTTTGTCCTGAATTTTTG 109333
Query 64362 GCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCA 64421
||| ||| ||| | || || || ||||| || | || | ||| || ||||
Sbjct 109334 CCTTCACATTCTCAATAGTGTCTGAAGCCTCCACCTCGAGGGTGATGGTA---CCCGTCA 109390
Query 64422 AAGTTTTTACGAAAATTTGCATT 64444
||||||||||| |||||||||
Sbjct 109391 GGGTTTTTACGAAGATTTGCATT 109413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499638573176680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |