Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq33 109 7e-19 >seq33 Length=1899332 Score = 109 bits (120), Expect = 7e-19 Identities = 255/379 (67%), Gaps = 7/379 (2%) Strand=Plus/Minus Query 116236 AAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 116295 |||| |||| |||| || | |||||||| || | || || || || || |||||||| Sbjct 686223 AAAACAAATGCATCAGCTAATCCTTGGACTCCAATTCCGATGGGTCGGTGCCTCATATTT 686164 Query 116296 GACTTTCGAGCGGTCTC-CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 116354 || ||| || ||| ||| |||||| |||| ||| |||| |||||||||| | Sbjct 686163 GAGTTTTTTGCC-TCTGGCACTGGATAATAATTTACATCAATAATTTTATTTAGATTCTG 686105 Query 116355 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 116414 || | | ||| || | ||| | | || | ||| | | | | || ||||| Sbjct 686104 AGTTATAGTCTTAGTAACTTCCTTTAATTTGGTGAAATTATATGTTT---TGTCCTCATT 686048 Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG- 116473 ||| || || | || ||||| || ||||| ||||||| ||||| | || || Sbjct 686047 CACAAACATATTTAAAGCAATTGATGCTAGATTGCACACAGCCACTTCATC-TGATGAGG 685989 Query 116474 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 116533 |||| |||| |||||| || ||||| || | ||||| || |||||||||||||| | Sbjct 685988 TGTATTCTACAATTTCAGTGCACAAGTTGCTGCATTTAATAGTACCCAAGTTCTTTTGGT 685929 Query 116534 TTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGG 116593 | ||| | || || | ||| || || ||||| ||||| || || || || ||| | Sbjct 685928 TGCTTTTTCTATTGCATGAATCTTTATAAAGCATGTATGGAGTTCCTGTTTCAACTTGTG 685869 Query 116594 ACTTGAGAATAGCCTTCCA 116612 | || |||||| ||||| Sbjct 685868 CTTCGATAATAGCTTTCCA 685850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613499554166520