Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq33 159 4e-34 >seq33 Length=1899332 Score = 159 bits (176), Expect = 4e-34 Identities = 480/727 (66%), Gaps = 17/727 (2%) Strand=Plus/Minus Query 105925 TCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTG 105984 || |||| |||| ||||| | || | |||||||| |||||||||| ||||| ||||| Sbjct 686566 TCGTCTCTGATAAATGTTGGAAGTAAATGGTTCAAATGATTCATTATTTCCCAATATTTG 686507 Query 105985 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTT 106044 || ||||| || ||||||||||| || | || || || | |||||| | || Sbjct 686506 AGCAGTGGATGCAGTTGGCATTGGAGCTAATAATAGGGAATTTCTAAGACCATGTTTGGC 686447 Query 106045 GATGCGTTCCTTGAGA-ACATCCCAGTCGT--AGT-TGAGCTTGGTTTCACCTTCCCACA 106100 || ||| ||||| ||| || | || ||| || | ||||| | | ||||| Sbjct 686446 AATTTTTTCTTTGAGTGACACCCAATTCCACAAGTCTGTGGG-GGTTTTA---TTCCACA 686391 Query 106101 TATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTT 106160 ||||| |||| | | ||||| | ||| | || ||| | ||||||||| || | Sbjct 686390 TATCATATTGCAATATACCTTGACTGGCAGGACAGCCTTCATAAGTCTCATAGACGCCAT 686331 Query 106161 GGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATAC 106220 ||||| || ||||| || || || || | | | ||| || |||||||| || Sbjct 686330 ACTTCTCAGCTAACTCACAACTGGCTTCTAGTGCCCCATAATAAATTGTTTCAAATATTT 686271 Query 106221 GAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCAC-AAAATAAATACA 106279 | ||| | | | ||| | || || | | ||| ||| |||| |||| || Sbjct 686270 GTTGATTTAATTTAATTGCTGCCTCACTTTCGTAAG-GTATACGCATTAAAACAAATGCA 686212 Query 106280 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCA 106339 || || | ||||| || || | || || |||| ||| | |||||| || ||| || Sbjct 686211 TCAGCTAATCCTTGGACTCCAATTCCGATGGGTCGGTGCCTCATATTTGAGTTTTTTGCC 686152 Query 106340 GTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 106398 ||| || |||||| ||||| ||||| | | |||||||| | || | | |||| Sbjct 686151 -TCTGGCACTGGATAATAATTTACATCAATAATTTTATTTAGATTCTGAGTTATAGTCTT 686093 Query 106399 TGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGG 106458 || | ||| | | ||| ||| | | || | || ||||| ||| || | Sbjct 686092 AGTAACTTCCTTTAATTTGGTGAAATTATATGTTT---TGTCCTCATTCACAAACATATT 686036 Query 106459 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTG-TGTACTCTAAAA 106517 | || |||||||| | |||||| |||||| ||||| | || | |||| |||| || Sbjct 686035 TAAAGCAATTGATGCTAGATTGCACACAGCCACTTCATC-TGATGAGGTGTATTCTACAA 685977 Query 106518 TTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGT 106577 |||| || ||||||||| | ||||| || ||||| ||||||||||| || ||| | | Sbjct 685976 TTTCAGTGCACAAGTTGCTGCATTTAATAGTACCCAAGTTCTTTTGGTTGCTTTTTCTAT 685917 Query 106578 TGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTG 106637 |||| | ||| || || |||||||| || || || || || |||| | || ||| | Sbjct 685916 TGCATGAATCTTTATAAAGCATGTATGGAGTTCCTGTTTCAACTTGTGCTTCGATAATAG 685857 Query 106638 CCTTCCA 106644 | ||||| Sbjct 685856 CTTTCCA 685850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589973447364280