Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq34 187 2e-41 seq12 134 1e-25 seq7 125 6e-23 seq198 102 7e-16 >seq34 Length=1862372 Score = 187 bits (206), Expect = 2e-41 Identities = 396/588 (67%), Gaps = 6/588 (1%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||||||||||| || ||| |||||||| || ||||| ||||||| || || Sbjct 1321358 GGAATTGATTTAGGAACTACCTATTCATGTGTTGGCGTCTGGCAGCATGGTAATGTGGAT 1321299 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || || || ||||||||||| || | || ||||| |||||||| | ||||| || ||| Sbjct 1321298 ATAATAGCTAATGATCAAGGGAATCGCACCACTCCCTCTTATGTCGCCTTCACCGATACT 1321239 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 || | ||||||| | || ||| | || | || ||||| | ||||| ||| Sbjct 1321238 GAGAGGCTCATTGGTGACGGCGCGAAAAACCAGGTGGCTCTGAATCCAAGTAATACAATT 1321179 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 |||||||| ||||| | || || ||| | | ||||| | | |||| |||| | Sbjct 1321178 TTTGATGCCAAACGACTTATCGGTCGAAAATATGATGATCCAAAGATTCAACAAGATCTC 1321119 Query 550238 AAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCAT 550297 || |||||||| ||| || | || |||| ||||| || | || | | | || Sbjct 1321118 AAACATTGGCCATTCAAAGTGGTCAATGAAGGCGGAAAGCCAAAGATCCAGGTTGAATAT 1321059 Query 550298 GAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATG 550357 |||| ||||| || | || ||| |||| ||||| | || || ||| Sbjct 1321058 AAAGGCAAAACTAAACGCTTCGCTCCTGAAGAAATCAGTAGCATGGTGCTGATTAAGATG 1320999 Query 550358 AAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCA 550417 ||| | || |||| | | || || ||| | | | || || ||||| ||||| Sbjct 1320998 AAAGATGTCGCTGAAGCTTATTTGGGGAAACCAGTAAAGAAAGCGGTTATAACCGTACCG 1320939 Query 550418 GCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTT 550477 || || || || || || ||| | |||||||| ||||| |||||| || || || || Sbjct 1320938 GCTTACTTCAACGATTCTCAAAGACAAGCTACCAAAGACGCTGGAGCCATAGCCGGGCTG 1320879 Query 550478 AATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 || || | |||||||| |||||||| || |||||||| | || |||||| | |||||| Sbjct 1320878 AACGTGTTGCGTATTATTAATGAACCAACAGCTGCTGCTTTAGCTTATGGATTAGATAAA 1320819 Query 550538 CATAATGATCAA---GAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 | ||| || |||| || || || ||||||||| ||||||| Sbjct 1320818 -AACCTGA--AAGGCGAACGAAACGTGCTGATCTTTGATCTTGGAGGT 1320774 Score = 134 bits (148), Expect = 1e-25 Identities = 521/808 (64%), Gaps = 12/808 (1%) Strand=Plus/Minus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTT-G 551847 |||||| |||| |||||||||||||| ||||| | ||| || || | || || | Sbjct 1320708 TGGAGACACTCACCTTGGTGGCGAAGACTTTGACAGTAGGCTTGT-TAATTTCCTGGCCG 1320650 Query 551848 AAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAG-CTCTTCGTCGT 551906 | || |||||| | ||| | ||| ||| | ||| | |||||| ||||| | ||| Sbjct 1320649 ACGAATTTAAAAGGAAACATAAAAAAGATTTGAATAC-TAACCCAAAGTCTCTTAGACGT 1320591 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 || |||| || ||| ||||| |||||| | | || || |||| || | | || Sbjct 1320590 CTTCGAACCGCAGCCGAGAGAGCAAAACGAACCTTGTCCTCCAGTACCGAAGCGAGCATC 1320531 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 || | || | | | ||| || || || | | | | | || || || || Sbjct 1320530 GAGATTGACGCGCTGTATGAAGGCATAGACTTTTTCTCACGAGTGTCTAGAGCTCGCTTC 1320471 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||||| | ||||| | || | | |||| | ||||| ||||| ||| | | | Sbjct 1320470 GAAGAATTGAACTCTGACTTATTCCGTACAACACTCGAACCTGTAGAGAAAGCTCTGAAT 1320411 Query 552087 GATTCAAAGATTGATAAA--TCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAA 552144 ||| | || | ||||| | | | | ||||| || || | ||||||||||| ||| Sbjct 1320410 GATGCCAAACTGGATAAGAGTGCTA--TTCATGACATCGTTTTGGTTGGTGGATCCACAC 1320353 Query 552145 GAATTCCTAAAATTCGCGAAATG--TTAAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 | || || ||||| | ||| | | | ||| || ||| ||||| || || || Sbjct 1320352 GTATCCCCAAAATACA-GAATTTACTGCAAAACTTCTT-CAACGGTAAGAAGTTGAACTT 1320295 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 | | ||||| ||||| || ||||| || ||||| ||| |||| || ||||| ||| Sbjct 1320294 GTCTATAAATCCTGATGAAGCAGTTGCATACGGTGCAGCAGTTCAGGCTGCTATACTTAG 1320235 Query 552263 TGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 ||| || | | || | ||| | || | | || ||||| ||||| ||||| | Sbjct 1320234 CGGAGAACGTCACTCGAAGATCCAAGACGTTCTGTTGGTGGATGTCGCTCCTTTATCTTT 1320175 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 ||| | || || | || || ||||||| | | | || | || | | || || Sbjct 1320174 GGGTATCGAGACTGCCGGTGGAGTTATGACGGCTATAGTAGAACGTAACGCAAAGATACC 1320115 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCA 552442 ||| ||| | |||| || | |||| ||| ||||| || | || || || ||||| Sbjct 1320114 TTGCAAACATTCTCAAACCTTCACCACGTTTTCTGATAACCAGTCAGCCGTCACCATTCA 1320055 Query 552443 AATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTT 552502 | ||| |||||||||||| | | || ||| | ||||| | || || || || | | Sbjct 1320054 AGTTTACGAAGGAGAAAGAGCAATGACAAAAAACAATAACCTGCTGGGAACGTTCGACCT 1319995 Query 552503 AGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGA 552562 || || ||||| ||||||||||| || || ||||| || || | |||||| | || Sbjct 1319994 GACTGGCATCCCTCCAGCTCCTCGTGGGGTGCCACAAATAGACGTGGCCTTCGATTTAGA 1319935 Query 552563 TGCCAATGGAATTTTGAATGTGACTGCT 552590 ||| || || ||| | || ||| ||||| Sbjct 1319934 TGCTAACGGCATTCTCAACGTGTCTGCT 1319907 >seq12 Length=2918994 Score = 134 bits (148), Expect = 1e-25 Identities = 245/354 (69%), Gaps = 16/354 (5%) Strand=Plus/Minus Query 368793 AGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATT 368852 ||| || || || |||||||||||||| ||||||||||| | |||| ||||||||||| Sbjct 2513674 AGTCTTCGACTGTTGGTTTGAATCAGGATCTATGCCTTACGCTCAATGTCATTATCCATT 2513615 Query 368853 TGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGAATC 368912 ||| ||| ||| | ||||| | | | || || || |||| | | ||| Sbjct 2513614 TGAAAACAAAAAGGAGTTTGAGGAAGTT-----TTCCCTG-CTAATTTCATTGCTGAAGG 2513561 Query 368913 AATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTTCGA 368972 ||||| |||||| | |||||||||||||| || | || ||||| ||||| | || | Sbjct 2513560 TATTGACCAAACAAGAGGTTGGTTTTATACTCTTATTGTCTTATCAACAGCACTGTTTAA 2513501 Query 368973 TAAACCGGCTTTTAAAAATGTAATAGTAACTGG--TATTGTTAATGCATCTGATGGTCAA 369030 |||||| ||||||| || | || | | ||| || ||||| || |||||||| ||| Sbjct 2513500 AAAACCGCCTTTTAAGAACCTTATCGCTAATGGTTTAGTGTTA--GCTTCTGATGGGCAA 2513443 Query 369031 AAGATGTCAAAAAGTAAGGGTAATTATTCCGATCC---TAATATTTTAATTGATAAATTT 369087 || ||||| || || ||| || || | ||||| | | || ||| ||| | | Sbjct 2513442 AAAATGTCGAAGAGAAAGAAGAACTACCCGGATCCTCTTGAAGTTGTAA---CTAAGTAT 2513386 Query 369088 GGTGCTGATACTTTGAGATTATACCTATTGTCATCACCTGTAGTAAAAGCAGAA 369141 ||||||||| || | ||| | || || || || || || || ||||| ||| Sbjct 2513385 GGTGCTGATGCTCTAAGACTTTATCTTGTGAATTCTCCAGTGGTGAAAGCGGAA 2513332 Score = 125 bits (138), Expect = 6e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || || | |||||| || ||| || |||||||||||| | ||||| | ||| Sbjct 2849760 AGAACTAAATGAAGTGTTGATTCCTTTTGAATATTGTAATCGGAAAGAGTGCGCCCGTCT 2849819 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 ||||| || || || || ||||| | |||||| ||||| || |||||||| || |||||| Sbjct 2849820 TCAAGCTGCTTGCCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATTCCCTCCTTATCT 2849879 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTT 563442 |||||||| ||| || |||||||| |||| | | | ||| | |||| ||| Sbjct 2849880 TGAATTTTGGCTTTCACGTTTTCAATTGTGTCAGAGGGTTCAACTTCTAATGTAATGGTT 2849939 Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||||||| | |||||| || ||||||||||| Sbjct 2849940 TTACCAGTTAAAGTTTTCACAAAAATTTGCAT 2849971 Score = 120 bits (132), Expect = 2e-21 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || || |||||||| ||| || ||| ||||| |||| || || | Sbjct 2423507 AGACGCAGGACCAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAGAGGGTGCGC 2423448 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || || || |||||||| || | |||||||| || || || || |||||| Sbjct 2423447 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAACCTTTGCTGGTCTGGTGGGATACCTTCT 2423388 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || ||||||||||| || || ||| || ||||| | | |||||| ||| Sbjct 2423387 TTGTCTTGAATTTTAGCCTTAACATTCTCGATAGTATCTGAAGGCTCGACTTCGAGGGTA 2423328 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || ||||||||||| |||||||||||||| |||||| Sbjct 2423327 ATTGTCTTACCAGTAAGCGTTTTAACGAAAATCTGCATA 2423289 Score = 118 bits (130), Expect = 9e-21 Identities = 124/163 (76%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||||| || || |||||||| ||| || || |||||||| || | ||||| Sbjct 2852929 CTGAGACGCAGCACGAGATGAAGAGTAGACTCCTTCTGGATATTGTAGTCGGAAAGAGTG 2852988 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | |||||| | |||||||||||| || || | ||| || ||||| |||||||| ||| Sbjct 2852989 CGTCCATCTTCCAATTGTTTTCCGGCGAAGATCAATCTCTGTTGATCGGGAGGAATGCCT 2853048 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG 563416 || ||||||||||||||| ||| || ||||| ||||||| Sbjct 2853049 TCCTTATCTTGAATTTTTGCTTTAACGTTTTCAATGGTATCAG 2853091 Score = 116 bits (128), Expect = 3e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| ||||| | ||||| || ||| || |||||||||||||| | |||| Sbjct 2852248 AGACGAAGTACCAAGTGAAGAGTGGATTCCTTCTGAATATTGTAATCAGACAAGGTTCGC 2852307 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | ||| || ||||| || || | || ||||| || |||||||| ||||| Sbjct 2852308 CCATCTTCCAATTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCTGGAGGAATACCTTCC 2852367 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || || |||||||| ||| || |||||||| |||| | | | ||| || || Sbjct 2852368 TTGTCCTGAATTTTAGCTTTGACATTTTCAATTGTGTCAGAGGGCTCAACTTCTAGTGTG 2852427 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||| || ||||| | |||||| ||||| ||||||||| Sbjct 2852428 ATAGTCTTGCCAGTCAAAGTTTTGACGAAGATTTGCATA 2852466 Score = 111 bits (122), Expect = 1e-18 Identities = 153/210 (73%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||||||| ||| || ||| || || |||| || || | |||||||| Sbjct 2425548 CAAG-TGAAGGGTAGATTCCTTCTGAATGTTATAGTCAGAAAGGGTACGCCCATCTTCAA 2425490 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 | || || || ||||| ||||| | ||||| ||||| |||||||| || || || || | Sbjct 2425489 GCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGGA 2425430 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTA 563445 | || ||||| |||||| || |||| | | || ||| ||||| | ||||||| Sbjct 2425429 TCTTGGCCTTTACATTCTCAATAGTGTCAGAAGGC-TCCACTTCAAGAGTGATAGTTTTA 2425371 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || || || ||||||||||||||| Sbjct 2425370 CCAGTGAGGGTCTTCACGAAAATTTGCATA 2425341 Score = 107 bits (118), Expect = 2e-17 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || ||||| || || ||| |||||| || ||||| |||| || || | Sbjct 2423280 GAGACGCAGAACAAGGTGGAGCGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTGCG 2423221 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||||| | || ||||| || || || |||| |||||||| || ||||| ||||| Sbjct 2423220 ACCGTCTTCTAACTGCTTTCCAGCGAAGATCAGTCGCTGCTGATCTGGGGGAATGCCTTC 2423161 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGT 563435 ||| ||||||||||| |||||| ||||| || || | | | ||| ||||| Sbjct 2423160 TTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGATGGCTCAACTTCAAGAGT 2423101 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||||||| || | ||||| || ||||| ||||| Sbjct 2423100 GATAGTTTTACCCGTCAAGGTTTTCACAAAAATCTGCAT 2423062 Score = 107 bits (118), Expect = 2e-17 Identities = 150/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||||||| |||||| ||||||||||||| || |||| | |||||||| Sbjct 2424864 CAAG-TGAAGGGTAGATTCTTTCTGGATATTGTAATCAGAAAGGGTTCGTCCATCTTCAA 2424806 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 | || || |||||||| ||||| | ||||| || || ||||||||||| || || || | Sbjct 2424805 GCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGA 2424746 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTAC 563446 | || || || || || ||||||| | | ||| || || | ||||| | Sbjct 2424745 TCTTGGCCTTAACGTTTTCGATGGTATCAGAAGGCTCAACTTCTAGGGTGATGGTTTTTC 2424686 Query 563447 CAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||| | || || |||||||| |||||| Sbjct 2424685 CAGTCAAGGTCTTTACGAAAATCTGCATA 2424657 Score = 107 bits (118), Expect = 2e-17 Identities = 150/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||||||| |||||| || |||||||||| ||||| | |||||||| Sbjct 2425092 CAAG-TGAAGGGTAGATTCTTTCTGGATGTTGTAATCAGAAAGAGTACGCCCATCTTCAA 2425034 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 | || || ||||| || ||||| | ||||| ||||| ||||||||||| || || || | Sbjct 2425033 GCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCTTCCTTGTCCTGGA 2424974 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTAC 563446 | || || || ||||| ||||||| | | ||| || || | |||||| | Sbjct 2424973 TCTTGGCCTTAACATTTTCAATGGTATCAGAAGGCTCAACTTCTAGGGTGATAGTTTTTC 2424914 Query 563447 CAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||| | || || |||||||| |||||| Sbjct 2424913 CAGTCAAGGTCTTCACGAAAATCTGCATA 2424885 Score = 105 bits (116), Expect = 5e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | ||||||||| ||| || ||| || || || | ||||| | | Sbjct 2425331 AGACGCAGGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGT 2425272 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||||||| || || ||||| || ||||| | ||||| ||||| ||||||||||| Sbjct 2425271 CCATCTTCAAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCTTCC 2425212 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 || ||||| || || ||||| |||||| || |||| | ||| || ||||| Sbjct 2425211 TTGTCTTGGATCTTGGCCTTTACATTCTCAATAGTGTCAGAAGGTTCTAC-CTCCAGAGT 2425153 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| ||||| | || || |||||||| |||||| Sbjct 2425152 GATGGTTTTTCCAGTCAATGTCTTCACGAAAATCTGCATA 2425113 Score = 104 bits (114), Expect = 2e-16 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 563259 ACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGA 563318 ||| | ||| | ||||||||| |||||| |||||||| || | || || | | Sbjct 2852706 ACGCAATACTAAGTGAAGGGTAGATTCTTTTTGGATATTGTAGTCTGATAATGTGCGTCC 2852765 Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||| | ||||| |||||||| || | || |||||||||||| || || || || || Sbjct 2852766 ATCTTCCAACTGTTTGCCGGCAAAGATCAATCGTTGCTGATCAGGTGGGATACCCTCCTT 2852825 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAAC 563438 ||| || ||||| ||| || || ||||| |||| | | || | ||| | Sbjct 2852826 ATCCTGGATTTTGGCTTTAACATTTTCGATTGTGTCAGAAGGCTCAACCTCTAAAGTGAT 2852885 Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| ||||| | ||||| ||||||||||||||| Sbjct 2852886 GGTTTTGCCAGTCAATGTTTTTACGAAAATTTGCATA 2852922 Score = 102 bits (112), Expect = 7e-16 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 563284 TCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAA 563343 ||||| ||| ||||| |||| || || | ||||||||| || || ||||| || Sbjct 2423936 TCTTTCTGAATGTTGTAGTCAGAAAGGGTACGCCCATCTTCAAGCTGCTTGCCGGCGAAG 2423877 Query 563344 ATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCC 563403 ||||| | ||||| || || ||||||||||| || ||||| ||||| ||||| Sbjct 2423876 ATAAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATTTTAGCCTTTACGTTT 2423817 Query 563404 TCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAAC 563462 ||||| ||||| | | | || ||| || || | |||||||||||| || || || || Sbjct 2423816 TCAATGGTATC-GGAAGGCTCCACTTCAAGGGTGATAGTTTTACCAGTGAGGGTCTTCAC 2423758 Query 563463 GAAAATTTGCATA 563475 |||||| |||||| Sbjct 2423757 GAAAATCTGCATA 2423745 Score = 95.1 bits (104), Expect = 1e-13 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 563284 TCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAA 563343 ||||| ||| ||||| |||| || || | | ||||||||| || || || || || Sbjct 2424392 TCTTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTCAAGCTGCTTGCCAGCGAAG 2424333 Query 563344 ATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCC 563403 ||||| | ||||| ||||| ||||||||||| || ||||| || || || || Sbjct 2424332 ATAAGACGCTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTAACATTT 2424273 Query 563404 TCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACG 563463 || || ||||||| | | |||||| || | |||||| ||||| | || || ||| Sbjct 2424272 TCGATGGTATCAGAAGGCTCAACTTCGAGGGTGATAGTTTTTCCAGTCAAGGTCTTCACG 2424213 Query 563464 AAAATTTGCATA 563475 ||||| |||||| Sbjct 2424212 AAAATCTGCATA 2424201 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 ||||||||||| | || || || ||| | | ||| || ||||| |||| ||||| | Sbjct 2425787 AGACGGAGTACCAAGTGCAGAGTCGACTCTTTCTGG--ATGTTGTAGTCAGAAAGAGTGC 2425730 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 | |||||| || || || || || || ||||| | ||||| || || |||||||||| Sbjct 2425729 GTCCATCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTT 2425670 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAG 563434 | || ||||| ||||| || || || || ||||||| | ||| || | Sbjct 2425669 CCTTGTCTTGGATTTTAGCCTTAACGTTTTCGATGGTATCAGAAGGCTCGACTTCAAGGG 2425610 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | ||| || ||||| | || || |||||||| |||||| Sbjct 2425609 TGATAGTCTTTCCAGTCAAGGTCTTCACGAAAATCTGCATA 2425569 Score = 86.0 bits (94), Expect = 5e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || |||||||| || | ||| | ||| ||| || |||||||||||||| | ||| Sbjct 2849979 CTAAGACGGAGGACTAAATGCAACGTAGATTCCTTCTGAATATTGTAATCAGACAATGTT 2850038 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||| || | ||| || ||||| || || | ||| || || || || |||||||| Sbjct 2850039 CGTCCATCCTCCAATTGCTTGCCGGCGAAGATCAATCTCTGTTGGTCTGGTGGAATTCCC 2850098 Query 563374 TCTTTATCTTGAATTTT 563390 ||||| ||||||||||| Sbjct 2850099 TCTTTGTCTTGAATTTT 2850115 >seq7 Length=3107902 Score = 125 bits (138), Expect = 6e-23 Identities = 247/359 (69%), Gaps = 6/359 (2%) Strand=Plus/Minus Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 |||||||||||| | || || | | || | ||| | || || || || || |||||| Sbjct 181071 GATGCTAAACGTCTCATCGGCCGCAAATTCGAAGATGCCACCGTACAAGCCGACATGAAG 181012 Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAA 550300 || ||||||||| | |||| | || ||| || || | || ||| | ||||| | Sbjct 181011 CACTGGCCTTTCGAGGTTGTCAGTGACGGTGGTAAGCCAAAGATC-AAGGT-CTCATACA 180954 Query 550301 --GGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGA 550358 ||| | ||| || | || || || || || ||||| | | ||||||| Sbjct 180953 AGGGAGAAGACAAAACCTTCTTCCCTGAGGAAGTTAGCTCAATGGTGCTCACAAAAATGA 180894 Query 550359 AACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGA-TGCAGTAATAACTGTACCA 550417 | |||||||| || | | | || ||| | | | | || ||||||||| || || ||| Sbjct 180893 AGGAAACAGCCGAGGCCTATCTCGG-CAAAACGGTGCAGAATGCAGTAATCACGGTTCCA 180835 Query 550418 GCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTT 550477 || || || || ||||||||| | ||||| || |||||||| || || |||| | Sbjct 180834 GCGTACTTCAACGACTCACAAAGACAAGCCACGAAAGATGCGGGTACCATCTCTGGCTTG 180775 Query 550478 AATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || ||||| ||||| ||||||||||| ||||||||||| |||| || || ||||| || Sbjct 180774 AACGTTCTCCGTATCATCAATGAACCGACTGCTGCTGCGATTGCGTACGGCCTTGACAA 180716 >seq198 Length=472645 Score = 102 bits (112), Expect = 7e-16 Identities = 248/373 (66%), Gaps = 2/373 (1%) Strand=Plus/Minus Query 552204 AGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCT 552263 ||| | ||||| ||||||||||| || | ||| || || |||||||| || ||| | Sbjct 268135 AGTTTGAATCCTGATGAGGCTGTGGCGTGTGGGGCTGCTATTCAAGCCGCCATTTTGAAC 268076 Query 552264 GGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTT 552323 || || |||||||| || | | | |||| || || ||| ||||| || || Sbjct 268075 GGCCAGCGACATGAAAAAATAAGAGACCTATTACTAGTCGACGTTGTACCTCTTTCCCTA 268016 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 || ||||||| | | |||| || ||| || | | || ||||| ||| | || ||| Sbjct 268015 GGAGTAGAAACTGCTAGAGGAATGATGTTCAAAGTCGTAGAGAGAAACACTCCAATACCT 267956 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 || | ||| | | | || |||| | ||| |||| | | | ||||| || Sbjct 267955 TGCCAGAAAACCAAAGAAATTACTACATTAGAAGACTATCAGAATCGCATGACAATCGAA 267896 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA-ATTT 552502 || |||||||| ||||||| || || ||||| |||||| || | | || || | || Sbjct 267895 ATATTTGAAGGTGAAAGAAGCTTAACAAAAGACAATAAT-TTGTTAGGAGTTATAGAATT 267837 Query 552503 AGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGA 552562 ||||| || ||||| || | || ||| | |||| || |||||||| || || | Sbjct 267836 GACTGGTATACCGCCTGCACCAAGAGGCGTAGCCAAAATAGATGTTACTTTTGACATAAA 267777 Query 552563 TGCCAATGGAATT 552575 ||| ||||| ||| Sbjct 267776 TGCTAATGGTATT 267764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029243274143530