Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq416 122 1e-22 >seq416 Length=155529 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 37440 TCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCT 37499 ||| | || || || ||||| || ||| ||||| |||||||||| ||| || ||||| Sbjct 138482 TCTCTAATGTATGTGTCAATGAGCAAAGAGTACATCTCAGAGTGAACATTCTCCATAGCA 138423 Query 37500 ATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTA 37559 ||||| || ||||| || || || ||||||| | ||| || || | | | || | | Sbjct 138422 ATCTGGAATCCATAGAAGCATCTGGCTTCAGTCACTTGCACCTCTTGAGAGAAGCGTTCC 138363 Query 37560 GCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATA 37619 ||||||| |||||||| || |||||| || ||||||||||| || |||| ||| || Sbjct 138362 ACTAAGTTCTCATTAACAATGCCATCAGACGCAGCAAAGAAAGCCAGCACATGTTTGATG 138303 Query 37620 AAATGTCTTTCA 37631 || ||||| ||| Sbjct 138302 AAGTGTCTCTCA 138291 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/125 (76%), Gaps = 1/125 (1%) Strand=Plus/Minus Query 37194 AAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtt 37253 |||||| |||||||| |||| ||||| || || ||||| ||||| || || | Sbjct 138920 AAACCT-CATCTCTAGAAATCAGCTCATTGCTGAATGTCAATCCAGGCATCAATCCGCGC 138862 Query 37254 tttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCA 37313 || || |||||||| |||| ||||||| ||||| ||||| || ||||||||||| ||| Sbjct 138861 TTCTTCATCCAAAAGATTGATGCAAAACTGCCAGAGAAGAATATGCCTTCAACTGCAGCA 138802 Query 37314 AATGC 37318 || || Sbjct 138801 AAGGC 138797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592309418251880