Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq33 161 1e-34 seq62 87.8 2e-12 >seq33 Length=1899332 Score = 161 bits (178), Expect = 1e-34 Identities = 492/746 (66%), Gaps = 17/746 (2%) Strand=Plus/Plus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||||| |||||| || || |||| || || ||||| ||||| |||||||| || | Sbjct 685848 TTTGGAAAGCTATTATCGAAGCACAAGTTGAAACAGGAACTCCATACATGCTTTATAAAG 685907 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 || | || || | || || ||||||||||| ||||| || || || || || | | Sbjct 685908 ATTCATGCAATAGAAAAAGCAACCAAAAGAACTTGGGTACTATTAAATGCAGCAACTTGT 685967 Query 75996 GCACGGAAATTTTAGAGTACA-CAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCA 76054 |||| |||||| |||| |||| | || | ||||| |||||| |||||| | |||||| Sbjct 685968 GCACTGAAATTGTAGAATACACCTCATCA-GATGAAGTGGCTGTGTGCAATCTAGCATCA 686026 Query 76055 ATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCAT 76114 || || | | || ||| ||||| || | || | | ||| ||| | | Sbjct 686027 ATTGCTTTAAATATGTTTGTGAATGAGGACA---AAACATATAATTTCACCAAATTAAAG 686083 Query 76115 GAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCC 76174 ||| | || |||| | | || | |||||||| | | ||||| ||||| |||||| Sbjct 686084 GAAGTTACTAAGACTATAACTCAGAATCTAAATAAAATTATTGATGTAAATTATTATCCA 686143 Query 76175 GT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGG 76233 || ||| || ||| || |||||| | ||| |||| || || | || || ||||| Sbjct 686144 GTGCCAGA-GGCAAAAAACTCAAATATGAGGCACCGACCCATCGGAATTGGAGTCCAAGG 686202 Query 76234 TCTCGCGGATGTATTTATTTT-GTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGA 76292 | || |||| |||| |||| ||| ||| | | || || | ||| | | Sbjct 686203 ATTAGCTGATGCATTTGTTTTAATGCGTATAC-CTTACGAAAGTGAGGCAGCAATTAAAT 686261 Query 76293 TGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGG 76352 | ||| | || |||||||| || ||| | | | || || || |||||||| || | Sbjct 686262 TAAATCAACAAATATTTGAAACAATTTATTATGGGGCACTAGAAGCCAGTTGTGAGTTAG 686321 Query 76353 CTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTC 76412 |||| | || ||||||||| | ||| || | ||| || ||||| | | | Sbjct 686322 CTGAGAAGTATGGCGTCTATGAGACTTATGAAGGCTGTCCTGCCAGTCAAGGTATATTGC 686381 Query 76413 AGTTTGATATGTGGGAAGGTGAAACCAAGCTCA-ACT--ACGACTGGGATGT-TCTCAAG 76468 | | |||||||||| | | ||||| | || ||| || | || ||| ||||| Sbjct 686382 AATATGATATGTGGAA---TAAAACC-CCCACAGACTTGTGGAATTGGGTGTCACTCAAA 686437 Query 76469 GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCC 76528 ||| || | | |||||| | || || || | || ||||||||||| || Sbjct 686438 GAAAAAATTGCCAAACATGGTCTTAGAAATTCCCTATTATTAGCTCCAATGCCAACTGCA 686497 Query 76529 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 ||||| || ||||| ||||| |||||||||| |||||||||| || | ||||| || Sbjct 686498 TCCACTGCTCAAATATTGGGAAATAATGAATCATTTGAACCATTTACTTCCAACATTTAT 686557 Query 76589 CTGAGAAGAACCCTCGCAGGTGAGTT 76614 | |||| || | | ||||||| || Sbjct 686558 CAGAGACGAGTCTTGTCAGGTGAATT 686583 >seq62 Length=1215844 Score = 87.8 bits (96), Expect = 2e-12 Identities = 241/364 (66%), Gaps = 4/364 (1%) Strand=Plus/Plus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 || ||||| || || ||| | || || ||| | || || ||| ||||||| || ||| Sbjct 30357 CCTGGTACTGGTAAAACCTTACTGGCAAAAGCAACAGCTGGAGAAGCAAATGTGCCCTTC 30416 Query 175375 ATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGT 175433 || |||| || | | | || ||||||||||||| ||||| ||| || ||| || Sbjct 30417 ATAACAGTT-TCAGGATCTGAGTTCTTGGAGATGTTTGTGGGTGTTGGTCCCTCAAGAGT 30475 Query 175434 TCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGAT 175493 || || | || || || || || || || || ||| | |||||||||||||| Sbjct 30476 CCGTGACATGTTCTCCATGGCACGTAAACATGCGCCTTGCATTCTGTTCATTGATGAGAT 30535 Query 175494 TGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACA 175553 ||| || ||||||| | || | | | | | || | || || ||| | || | | Sbjct 30536 TGACGCTGTGGGCAGGAAAAGAGGAGGTCGCAGTTTCGGAGGTCATTCCGA-ACAGGAGA 30594 Query 175554 A-ACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGG 175612 | ||| | |||||||| || || |||||||| || ||| | ||| | |||||| Sbjct 30595 ACACATTGAATCAACTTCTAGTTGAAATGGATGGGTTCAACACTACAACTAACGTTGTGG 30654 Query 175613 TTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTT 175672 | | ||||| || || || |||||||| | ||| | ||| | || | || || | | Sbjct 30655 TCCTGGCGGCTACAAACCGAGTGGATATTTTAGATAAAGCCTTGCTAAGACCTGGCAGAT 30714 Query 175673 TTGA 175676 |||| Sbjct 30715 TTGA 30718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562165251360