Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq324 102 3e-18 seq154 102 3e-18 seq17 102 3e-18 seq48 100 9e-18 seq2 100 9e-18 seq737 98.7 3e-17 seq480 98.7 3e-17 seq439 98.7 3e-17 seq321 98.7 3e-17 seq314 98.7 3e-17 seq57 98.7 3e-17 >seq324 Length=274638 Score = 102 bits (112), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 120318 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTC 120259 Query 2825 AACCCCGGGCTTCAGC 2840 || |||||| ||| || Sbjct 120258 AATCCCGGGTTTCGGC 120243 >seq154 Length=621563 Score = 102 bits (112), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 248393 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 248334 Query 2825 AACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 248333 GATCCCGGGTTTCGGC 248318 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 249943 ATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 249884 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 249883 ATCCCGGGTTTCGGC 249869 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 248563 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 248504 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 248503 CCGGGTTTCGGC 248492 Score = 96.9 bits (106), Expect = 1e-16 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822 || || || ||| |||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct 250228 TTCATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAGAGGTCCCTGGT 250169 Query 2823 TCAACCCCGGGCTTCAGC 2840 || | |||||| ||| || Sbjct 250168 TCGATCCCGGGTTTCGGC 250151 Score = 96.9 bits (106), Expect = 1e-16 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822 || || || ||| |||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct 252596 TTCATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAGAGGTCCCTGGT 252537 Query 2823 TCAACCCCGGGCTTCAGC 2840 || | |||||| ||| || Sbjct 252536 TCGATCCCGGGTTTCGGC 252519 Score = 89.7 bits (98), Expect = 2e-14 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 || || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 252312 ATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 252254 >seq17 Length=2641889 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 2177373 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 2177432 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 2177433 TCCCGGGTTTCGGC 2177446 >seq48 Length=1425542 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 785469 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAAT 785528 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 785529 CCCGGGTTTCGGC 785541 >seq2 Length=4301520 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 134197 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAAT 134256 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 134257 CCCGGGTTTCGGC 134269 >seq737 Length=32018 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 2981 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 3040 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 3041 CCTGGTTTCGGC 3052 >seq480 Length=109863 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 5556 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 5497 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 5496 CCGGGTTTCGGC 5485 >seq439 Length=134552 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 125031 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 124972 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 124971 CCGGGTTTCGGC 124960 >seq321 Length=242833 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 21754 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 21695 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 21694 CCGGGTTTCGGC 21683 >seq314 Length=260468 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 19455 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 19514 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 19515 CCGGGTTTCGGC 19526 >seq57 Length=1406958 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 964270 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 964329 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 964330 CCGGGTTTCGGC 964341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15849427165065