Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq296 113 6e-19 seq416 93.3 6e-13 seq183 87.8 3e-11 >seq296 Length=269947 Score = 113 bits (124), Expect = 6e-19 Identities = 183/263 (70%), Gaps = 18/263 (7%) Strand=Plus/Minus Query 333080 TTGATGATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACG 333139 ||||| | ||||||||||| || | |||||| |||| ||||||||||| ||||||||| Sbjct 53927 TTGATCTTGTTGCGCACGACATCGATGCCGCGGTCGTTGGACGCGTTGAGCTCGAGCACG 53868 Query 333140 GCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTG 333199 || ||| | ||| || || | || |||||||||||||| |||| | || |||||| Sbjct 53867 GCGTCGCGGAAGGCGGCCCCGAGCAGCGCGCGCGCCAGGCACAGGATGGTGGTAGTCTTG 53808 Query 333200 CCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCC-GTCGGCG-------- 333250 || ||| || |||||||| | | | ||| || ||| || || ||| Sbjct 53807 CCGACGCCCGGAGGACCCGCGATTATTATGTTAGGAGCGTTCCCGGTGCGCGCAAACACT 53748 Query 333251 GCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATT 333310 |||| |||| ||| || | || |||||||| || ||||| || || || Sbjct 53747 GCCA--GCCTAGAG-------ACCGTGTCTTCGTTGCCCACGATGTCACTGAATACTATC 53697 Query 333311 GGGCGGTACTTTTCGATCCATGG 333333 || ||||| ||||| |||||||| Sbjct 53696 GGCCGGTATTTTTCTATCCATGG 53674 >seq416 Length=155529 Score = 93.3 bits (102), Expect = 6e-13 Identities = 132/179 (74%), Gaps = 5/179 (3%) Strand=Plus/Plus Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAAC 1456155 || || || || |||| | |||| ||| ||||| |||||||| |||||||||| | Sbjct 138704 GCTATTGAAACCCTGCCCTGTGTGAAGAAGAAGGCTGACTGGGCCCTGAAGTGGATTGCC 138763 Query 1456156 AAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCT 1456214 | | | | | | ||| ||||| ||||| || | | |||||| || || || ||||| | Sbjct 138764 A-GCAAGTCAGCCACA-TTTGCTGAGCGTATCATTGCCTTTGCTGCAGTTGAAGGCATAT 138821 Query 1456215 TTTTCTCGGGCAGTTTCTGCGCCA-TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 | ||||| |||||||| ||| || |||||||| | ||||||||||| | ||||| || Sbjct 138822 TCTTCTCTGGCAGTTT-TGCATCAATCTTTTGGATGAAGAAGCGCGGATTGATGCCTGG 138879 >seq183 Length=509878 Score = 87.8 bits (96), Expect = 3e-11 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 2133558 GACGAGATGGTGACGGTGCGCGATATTGACTTTTTCTCCATGTGCGAGCACCACCTGCTG 2133617 || |||||||| |||| || ||||| | || |||||||||||||| ||| || || Sbjct 145033 GATGAGATGGTCGTGGTGAAGGACATTGAAATGTTTTCCATGTGCGAGCATCACTTGGTG 145092 Query 2133618 CCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCCCGCGGGCAAGATCATCGGTCTGAGC 2133677 ||||| |||||||| | | ||||||||||| |||||||||| |||| ||||| Sbjct 145093 CCCTTCTACGGCAAGGTGTCCATTGGCTACCTGCCTCAGGGCAAGATCCTCGGGTTGAGC 145152 Query 2133678 AAG 2133680 ||| Sbjct 145153 AAG 145155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177715037517514