Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicoverpa_20armigera_20[genbank_20GCA_5F002156985.1_202017-05-22] 997 sequences; 337,072,206 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq33 609 3e-169 seq416 100 4e-16 >seq33 Length=1899332 Score = 609 bits (674), Expect = 3e-169 Identities = 1192/1747 (68%), Gaps = 20/1747 (1%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || || || || |||| ||||||||| || ||||| | || | |||| | |||||| Sbjct 686913 GCTGGCTTCGTGCGTAAATAGTACATTCCCGTTTTTAAGCCCATTTTCCACGCATAGAAA 686854 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || ||| ||| | ||| |||| |||| || || | ||||||||| | ||||| || Sbjct 686853 TGAATAGATGTCAATTTACCATAATTTGGTTCAGCAACATGAATATTGAAGGATTGGCTC 686794 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCC 68574 ||||| || || || ||||| || || ||||||| ||| | | ||| || | |||| Sbjct 686793 TGATCAATAAATGCCCCTCTGTCAGCAGCCATTTGTATTGTTGTTTTTACAGACACTTCC 686734 Query 68575 CAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAG-GCTCG--TATTTTGAATGGAT 68631 || | ||| ||| | | | | ||||| | |||| ||| |||||||||| ||| Sbjct 686733 CAGACAGTTTTATATAAGTCCCTTATATCTTTAGGAATTGCTTCAATATTTTGAATAGAT 686674 Query 68632 CCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAA 68691 ||| || | || || | ||| || || || |||| ||| || | || |||||| Sbjct 686673 CCATTATTGTGGATGATAAGATTTTTCATATCTTCATCCCATAAATCAGCTTCAGTTAAA 686614 Query 68692 ACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAA 68751 ||| | | ||| ||||||| | ||| ||||| || || || |||| | ||| Sbjct 686613 TCTCGTAACAAATGATGATTAACAACTTGGAATTCACCTGACAAGACTCGTCTCTGATAA 686554 Query 68752 ATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCA 68811 || || ||| ||||||| | |||||||||||||||| ||||||||||| |||||| Sbjct 686553 ATGTTGGAAGTAAATGGTTCAAATGATTCATTATTTCCCAATATTTGAGCAGTGGATGCA 686494 Query 68812 GTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTT 68871 |||||||| || || | |||| |||||||||||||||| | ||||| ||||| Sbjct 686493 GTTGGCATTGGAGCTAATAATAGGGAATTTCTAAGACCATGTTTGGCAATTTTTTCTTTG 686434 Query 68872 AGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATT 68931 || ||||| ||| | || | || |||||| | ||| ||||| | || Sbjct 686433 AGTGACACCCAATTCCACAAGTCTGTGGGGGTTTTATTCCACATATCATATTGCAATATA 686374 Query 68932 CCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCA 68991 || | ||| ||| | || | ||| || ||||| || | || ||||||| ||| Sbjct 686373 CCTTGACTGGCAGGACAGCCTTCATAAGTCTCATAGACGCCATACTTCTCAGCTAACTCA 686314 Query 68992 CAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGT 69051 ||||| || |||| ||| || |||||||||||||| || || | | ||| | | | Sbjct 686313 CAACTGGCTTCTAGTGCCCCATAATAAATTGTTTCAAATATTTGTTGATTTAATTTAATT 686254 Query 69052 GCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACC 69111 ||| | ||| ||| | || | | | | || ||||||||| || ||||| || || Sbjct 686253 GCTGCCTCACTTTCGTAAGGTATACGCATTAAAACAAATGCATCAGCTAATCCTTGGACT 686194 Query 69112 CCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAA 69171 ||||| ||||| |||| || ||| ||||||| ||| || ||||| | ||||||||| Sbjct 686193 CCAATTCCGATGGGTCGGTGCCTCATATTTGAGTTTTTTGCCTCTGGCACTGGATAATAA 686134 Query 69172 TTAATATCTATAATTTTATTAAGATTTCGGACTACTACT-TTAACCACGTCCTTTAGTTT 69230 || | ||| ||||||||||| ||||| | || | || | ||| || ||||||| ||| Sbjct 686133 TTTACATCAATAATTTTATTTAGATT-CTGAGTTATAGTCTTAGTAACTTCCTTTAATTT 686075 Query 69231 GAGAAAATCAAATC----GTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGAT 69286 | |||| | || |||| || | ||||||||||| | || | |||||||||| Sbjct 686074 GGTGAAATTATATGTTTTGTCC-TCATTCACAAACATATTTAAAGCAATTGATGCTAGAT 686016 Query 69287 TACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTAC 69346 | || || || || |||| || | |||| || || || || || | || || | Sbjct 686015 TGCACACAGCCACTTCATCTGATGAGGTGTATTCTACAATTTCAGTGCACAAGTTGCTGC 685956 Query 69347 ATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAA 69406 |||| ||||| |||| || | || || || ||| | || || | || || ||||| | Sbjct 685955 ATTTAATAGTACCCAAGTTCTTTTGGTTGCTTTTTCTATTGCATGAATCTTTATAAAGCA 685896 Query 69407 TAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCAT 69466 | | ||||| || ||||||| || | ||||||||||| |||||||| || ||| Sbjct 685895 TGTATGGAGTTCCTGTTTCAACTTGTGCTTCGATAATAGCTTTCCAAAGAACTTGAGCTC 685836 Query 69467 TTATTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCAT 69526 | | | || | | || |||||||||||||| ||| | ||| ||||| | Sbjct 685835 TCACTTGTTTCACGAAGCGACCCTCTTTTTCATATTTCTCATACAAAGCTTCAAATTCCT 685776 Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586 | |||||| || | | |||||||||||||| || ||||| | ||| | | || Sbjct 685775 CACCCCAACAGTCTGCTAGTCCAGGACATTCATGGGGGCACATGATACTCCAATCTTGAT 685716 Query 69587 CATCCTTA--ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTC 69643 | ||| |||| |||||| || | || || ||||| | ||| ||| || || |||| Sbjct 685715 --TGCTTTCTACTCTTTTCATGAACAAGTCAGGTATCCATAAAGC-ATAGAATAGCTCTC 685659 Query 69644 TGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAG 69703 ||| | |||||| || || || || ||||| | ||| || || || | ||||||| Sbjct 685658 TGGCACGGACTTCTTCTTTCCCAGTGTTCTTTTTCAAATCAAGGAATTCAAATATATCAG 685599 Query 69704 AATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTA 69763 |||||||||||||| ||||| || | | || |||| |||||| ||||| || |||| Sbjct 685598 CATGCCATGGTTCTAAGTATATGGCAAATGCGCCGGGTCTTTTATTACCTCCTTGGTCTA 685539 Query 69764 TGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCAT 69823 |||| |||||||| || || ||||| | ||| || | | ||||||||| ||||| Sbjct 685538 CATATCGAGCAGTGTTGTTGTACACTCTTAACATGGGTACTAGACCATTAGAGACACCAT 685479 Query 69824 TTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTATTCC 69881 |||| |||| |||||| |||| |||| | ||| | | || || |||||||| || Sbjct 685478 TTGTACCAGCTATATAAGTTCCCTTTGCTCTAATGCAGT-GTACATGA-AGACCTATCCC 685421 Query 69882 TCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCT 69941 || || ||||| || || ||||| |||| || |||||||| || ||||| ||||| Sbjct 685420 ACCAGCTGACTTAGAAATGAGGGCACATTGTTTTAACGTGTCATAAATTCCCTCAATGCT 685361 Query 69942 ATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATT 70001 |||||| |||| | |||||| || ||| | ||| | || |||| | || Sbjct 685360 ATCATCCCTCATTGCTATAAGAAAGCATGAAGATAATTGTGGTCGTGGAGTTGCTGCTGA 685301 Query 70002 AAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAAT 70061 || | || ||| ||| || || || ||||||| || || |||||||| || | || Sbjct 685300 GAAAAGAGTTGGACTTGCATGTGTAAAATATTTTTCTGACAGAAGATTGTAGGTGTTTAT 685241 Query 70062 AGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGG 70121 ||| || || || ||| |||||||| | || ||||| | ||||||||| || Sbjct 685240 AGCCCCCTCAATGTCTTCGCCATGTATTCCTATAGAAACTCGCATGAGCATATGCTGTGG 685181 Query 70122 TCGTTCT 70128 | |||| Sbjct 685180 CCTTTCT 685174 >seq416 Length=155529 Score = 100 bits (110), Expect = 4e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162 || |||| ||| ||||| ||| | ||||| ||||| ||||||||||| |||||||| | | Sbjct 137855 TTGGATAGATCGACTTCCTCAACGGTCCAGAACGAAGCCTCTGCCTTCTTGTACATTTCC 137796 Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAA 40197 || |||||| |||| |||||||| || |||||||| Sbjct 137795 CAGATATCAGGATACTGTATTGGGAATATAACAAA 137761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686900239399080